RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CLCA3PQ9Y6N3 262 aa6.24□□□□□ -1.41
ATXN3-236ENST00000556220 MED12Q93074 2177 aa6.24□□□□□ -1.41
ATXN3-236ENST00000556220 MEGF8Q7Z7M0 2845 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 URADA6NGE7 173 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ERI2A8K979 691 aaKnown RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 AKR1B10O60218 316 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 NPHS1O60500 1241 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 SERPIND1P05546 499 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 TPM3P06753 285 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 MPC1LP0DKB6 136 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 CDH1P12830 882 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 NPPBP16860 134 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 IDUAP35475 653 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 GRIA1P42261 906 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 CCR8P51685 355 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 DIO3P55073 304 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 HSD17B7P56937 341 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 RAB8AP61006 207 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 TBPL1P62380 186 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 EEF1A1P68104 462 aaKnown RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 RGS1Q08116 209 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ETFDHQ16134 617 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 PRAMEF20Q5VT98 475 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 EEF1A1P5Q5VTE0 462 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 PPP1R21Q6ZMI0 780 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 SDCCAG8Q86SQ7 713 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ZNF321PQ8N8H1 164 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 MORN4Q8NDC4 146 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 OR4K1Q8NGD4 311 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ZPLD1Q8TCW7 415 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 PTPMT1Q8WUK0 201 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 SLC44A1Q8WWI5 657 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 LPGAT1Q92604 370 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 DAZLQ92904 295 aaKnown RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 INTS12Q96CB8 462 aaKnown RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 JSRP1Q96MG2 331 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 PIGQQ9BRB3 760 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 BEX2Q9BXY8 128 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 OSBPL8Q9BZF1 889 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 PRTFDC1Q9NRG1 225 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 TREX1Q9NSU2 369 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 CNIH4Q9P003 139 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 KLHL42Q9P2K6 505 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-236ENST00000556220 IKBKGQ9Y6K9 419 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 EML6Q6ZMW3 1958 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 FREM1Q5H8C1 2179 aa6.23□□□□□ -1.41
ATXN3-236ENST00000556220 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 FREM3P0C091 2139 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 DOCK7Q96N67 2140 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 HEATR5AQ86XA9 2040 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TRBC2A0A5B9 178 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 C7orf72A4D263 438 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ANKRD34BA5PLL1 514 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SYNDIG1LA6NDD5 238 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 GOLGA6L6A8MZA4 724 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TRIM3O75382 744 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TRAPPC6AO75865 159 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TJP3O95049 919 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ACSL3O95573 720 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 IFNA16P05015 189 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 HPNP05981 417 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 CCND1P24385 295 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 GDF1P27539 372 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 PTPN7P35236 360 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 AHRP35869 848 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 HNF4AP41235 474 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SLCO1A2P46721 670 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 CDK9P50750 372 aaKnown RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 HNRNPFP52597 415 aaKnown RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ASPHQ12797 758 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SLC13A2Q13183 592 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 GAB1Q13480 694 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 NAE1Q13564 534 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 RUNX2Q13950 521 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 RCAN2Q14206 197 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TTLL9Q3SXZ7 439 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 PCID2Q5JVF3 399 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 LCTLQ6UWM7 567 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SH2D5Q6ZV89 423 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 CAND1Q86VP6 1230 aaKnown RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 CCDC170Q8IYT3 715 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TBC1D19Q8N5T2 526 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 PRELID2Q8N945 189 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 OR14A16Q8NHC5 309 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 GABPB2Q8TAK5 448 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ABTB1Q969K4 478 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 TRIM44Q96DX7 344 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 SPACA9Q96E40 222 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-236ENST00000556220 HAUS8Q9BT25 410 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 DOHHQ9BU89 302 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 MED18Q9BUE0 208 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 UGT2B28Q9BY64 529 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ANGPTL4Q9BY76 406 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 OR8D2Q9GZM6 311 aa6.22□□□□□ -1.41
ATXN3-236ENST00000556220 ACBD3Q9H3P7 528 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms