RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MIEF1Q9NQG6 463 aa14.05□□□□□ -0.16
ACTN1-217ENST00000556203 WBP11Q9Y2W2 641 aaKnown RBP14.05□□□□□ -0.16
ACTN1-217ENST00000556203 TMEM120BA0PK00 339 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 TMEM114B3SHH9 223 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 KLRC4-KLRK1H3BQV0 150 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 PEX1O43933 1283 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 SKAP2O75563 359 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 PCSK2P16519 638 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 S1PR1P21453 382 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 BGNP21810 368 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 TACR1P25103 407 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 MEOX1P50221 254 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 GPR85P60893 370 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 ABCE1P61221 599 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 MAGOHP61326 146 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 MRPS35P82673 323 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 ALDH6A1Q02252 535 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 SRSF1Q07955 248 aaKnown RBP eCLIP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 EXOSC7Q15024 291 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 PRSS53Q2L4Q9 553 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 GALNTL6Q49A17 601 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 RFTN2Q52LD8 501 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 TRMT12Q53H54 448 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 HLA-DQA1Q5Y7H0 255 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 RTL4Q6ZR62 310 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 SLC15A4Q8N697 577 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF441Q8N8Z8 693 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 PSD4Q8NDX1 1056 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 OR52R1Q8NGF1 315 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 C16orf52Q8NHV5 167 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 CTHRC1Q96CG8 243 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 EGLN2Q96KS0 407 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 SGCZQ96LD1 299 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 CCT7Q99832 543 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 TSPAN10Q9H1Z9 355 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 BCAP29Q9UHQ4 241 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF639Q9UID6 485 aa14.04□□□□□ -0.16
ACTN1-217ENST00000556203 EXO1Q9UQ84 846 aaKnown RBP14.04□□□□□ -0.16
ACTN1-217ENST00000556203 CLEC18AA5D8T8 446 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 NPIPA5E9PKD4 350 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 WISP2O76076 250 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 CBX7O95931 251 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF24P17028 368 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 SDC1P18827 310 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 GRK2P25098 689 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 SOX18P35713 384 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 RFC3P40938 356 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 NR0B1P51843 470 aaKnown RBP14.03□□□□□ -0.16
ACTN1-217ENST00000556203 KCNK10P57789 538 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 DUSP8Q13202 625 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 UBAP2LQ14157 1087 aaKnown RBP14.03□□□□□ -0.16
ACTN1-217ENST00000556203 CEBPEQ15744 281 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF791Q3KP31 576 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF628Q5EBL2 1059 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 XKR7Q5GH72 579 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 HHATQ5VTY9 493 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 LYPD8Q6UX82 237 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 CLEC18BQ6UXF7 455 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 GFRALQ6UXV0 394 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 FAM9CQ8IZT9 166 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 TAGAPQ8N103 731 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF781Q8N8C0 355 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 GOLM1Q8NBJ4 401 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 CLEC18CQ8NCF0 446 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 SIMC1Q8NDZ2 872 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ZNF675Q8TD23 568 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 MGARPQ8TDB4 240 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 KAT2AQ92830 837 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
ACTN1-217ENST00000556203 ADIPOR1Q96A54 375 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 TLCD1Q96CP7 247 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 SPACA9Q96E40 222 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-217ENST00000556203 PPP3R2Q96LZ3 170 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 TSSK3Q96PN8 268 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 BBS4Q96RK4 519 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 DEPPQ9NTK1 212 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 SEC14L3Q9UDX4 400 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 NPIPA1Q9UND3 350 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 CFL2Q9Y281 166 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 TMED5Q9Y3A6 229 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 BAHCC1Q9P281 2608 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 RELNP78509 3460 aa14.03□□□□□ -0.16
ACTN1-217ENST00000556203 A0A0G2JMM0 328 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 ATP6AP2A0A1C7CYW4 349 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 A0A1W2PPB8 328 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 A0A1W2PRS3 328 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 KIR3DP1A8MWS1 328 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 G3V3Y1 287 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 PEX11AO75192 247 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 SEMA7AO75326 666 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 ATP6AP2O75787 350 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 AGFG2O95081 481 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 UNC5CO95185 931 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 FBXO45P0C2W1 286 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 GPX3P22352 226 aa14.02□□□□□ -0.17
ACTN1-217ENST00000556203 MPIP34949 423 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms