RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 BRINP2Q9C0B6 783 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 PLEKHB1Q9UF11 243 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF639Q9UID6 485 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 SH3BGRL2Q9UJC5 107 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 PSME2Q9UL46 239 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 FIS1Q9Y3D6 152 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 POLR3HQ9Y535 204 aaPredicted RBP18.92■□□□□ 0.62
VTI1B-205ENST00000555543 EML6Q6ZMW3 1958 aa18.92■□□□□ 0.62
VTI1B-205ENST00000555543 C2orf92A0A1B0GVN3 265 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 AZIN1O14977 448 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ZG16O60844 167 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 RSL1D1O76021 490 aaKnown RBP18.91■□□□□ 0.62
VTI1B-205ENST00000555543 CLDN1O95832 211 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 FBXO45P0C2W1 286 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 DRD2P14416 443 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 CA7P43166 264 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 RBPJQ06330 500 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF763Q0D2J5 394 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 MAP4K2Q12851 820 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 C3AR1Q16581 482 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 GHDCQ8N2G8 530 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 LRRC25Q8N386 305 aaPredicted RBP18.91■□□□□ 0.62
VTI1B-205ENST00000555543 SLC15A4Q8N697 577 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 CDC26Q8NHZ8 85 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ADIPOR1Q96A54 375 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 EXOSC8Q96B26 276 aaKnown RBP18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ZBTB9Q96C00 473 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 MAGED4Q96JG8 741 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 TUBB1Q9H4B7 451 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 SACM1LQ9NTJ5 587 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 TINAGQ9UJW2 476 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF835Q9Y2P0 537 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 ZNF780BQ9Y6R6 833 aa18.91■□□□□ 0.62
VTI1B-205ENST00000555543 A0A1B0GUH1 482 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 FAM166BA8MTA8 275 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 TMEM233B4DJY2 109 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 NPHS1O60500 1241 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 CBX7O95931 251 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 PCSK2P16519 638 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 CNR1P21554 472 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 GPX3P22352 226 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 ARRB2P32121 409 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 PIGAP37287 484 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 ETV4P43268 484 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 DNASE1L1P49184 302 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 MRPS35P82673 323 aaKnown RBP18.9■□□□□ 0.62
VTI1B-205ENST00000555543 PRSS53Q2L4Q9 553 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 TRMT12Q53H54 448 aaKnown RBP18.9■□□□□ 0.62
VTI1B-205ENST00000555543 KANK2Q63ZY3 851 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 OR7G1Q8NGA0 311 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 OR10G3Q8NGC4 313 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 OR52N2Q8NGI0 321 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 OR2T11Q8NH01 316 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.9■□□□□ 0.62
VTI1B-205ENST00000555543 PAQR8Q8TEZ7 354 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 CTHRC1Q96CG8 243 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 FAM173AQ9BQD7 235 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 TTTY12Q9BZ98 90 aa18.9■□□□□ 0.62
VTI1B-205ENST00000555543 CHCHD2Q9Y6H1 151 aaPredicted RBP18.9■□□□□ 0.62
VTI1B-205ENST00000555543 GLSO94925 669 aaPredicted RBP18.89■□□□□ 0.61
VTI1B-205ENST00000555543 LRATO95237 230 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 P04436 131 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 PER3P56645 1201 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 FOXO1Q12778 655 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 HEPACAMQ14CZ8 416 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 KIAA0040Q15053 153 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.89■□□□□ 0.614e-11■■■□□ 14.9
VTI1B-205ENST00000555543 ZNF628Q5EBL2 1059 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 ARL13AQ5H913 290 aaPredicted RBP18.89■□□□□ 0.61
VTI1B-205ENST00000555543 FAM71E1Q6IPT2 247 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 Q6ZPB1 254 aaPredicted RBP18.89■□□□□ 0.61
VTI1B-205ENST00000555543 FAM47EQ6ZV65 393 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 SPPL2CQ8IUH8 684 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 CCDC116Q8IYX3 515 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 FAM13CQ8NE31 585 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 TP53INP1Q96A56 240 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 ITPAQ9BY32 194 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 ANKRA2Q9H9E1 313 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 MYNNQ9NPC7 610 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 PFDN4Q9NQP4 134 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 TUBA8Q9NY65 449 aaPredicted RBP18.89■□□□□ 0.61
VTI1B-205ENST00000555543 EXO1Q9UQ84 846 aaKnown RBP18.89■□□□□ 0.61
VTI1B-205ENST00000555543 DNAJC15Q9Y5T4 150 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 UNC79Q9P2D8 2635 aa18.89■□□□□ 0.61
VTI1B-205ENST00000555543 NPIPB8E9PQR5 432 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 CCL21O00585 134 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 RGS16O15492 202 aaPredicted RBP18.88■□□□□ 0.61
VTI1B-205ENST00000555543 BPGMP07738 259 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 DDCP20711 480 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PRPH2P23942 346 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 TACR1P25103 407 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 GSTM5P46439 218 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PPIAP62937 165 aaKnown RBP18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PLGLB1Q02325 96 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 C2orf80Q0P641 193 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 NNATQ16517 81 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 NTRK2Q16620 822 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PRAMEF20Q5VT98 475 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 HLA-DQA1Q5Y7H0 255 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 SLC22A10Q63ZE4 541 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms