RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 GOLGA8RI6L899 631 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 AQP7O14520 342 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 CDC40O60508 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
VRK1-204ENST00000555351 SNX4O95219 450 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 PROCP04070 461 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 TPOP07202 933 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 MYL2P10916 166 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 TSPAN8P19075 237 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 DCAF7P61962 342 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ACSM2AQ08AH3 577 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 SLC10A1Q14973 349 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 HEPACAMQ14CZ8 416 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 RPS6KA2Q15349 733 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ACSM2BQ68CK6 577 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ACAD11Q709F0 780 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 TRILQ7L0X0 811 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 CD163Q86VB7 1156 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 VWA5B2Q8N398 1253 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 FAM76AQ8TAV0 307 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ZNF675Q8TD23 568 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ASB5Q8WWX0 329 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 UCN3Q969E3 161 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ADIPOR1Q96A54 375 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 MARVELD3Q96A59 401 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 NTNG2Q96CW9 530 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ZNF681Q96N22 645 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 GAL3ST4Q96RP7 486 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 DEFB127Q9H1M4 99 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 GSTO2Q9H4Y5 243 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ACKR4Q9NPB9 350 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 TUBA8Q9NY65 449 aaPredicted RBP10.9□□□□□ -0.66
VRK1-204ENST00000555351 TBK1Q9UHD2 729 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 MID2Q9UJV3 735 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 CNOT11Q9UKZ1 510 aaKnown RBP10.9□□□□□ -0.66
VRK1-204ENST00000555351 EMCNQ9ULC0 261 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 NPFFR2Q9Y5X5 522 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ZNF780BQ9Y6R6 833 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 CELSR2Q9HCU4 2923 aa10.9□□□□□ -0.66
VRK1-204ENST00000555351 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 A0A1W2PPM1 405 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 FIGNL2A6NMB9 653 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 FAM166BA8MTA8 275 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 ACOX3O15254 700 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 PLIN3O60664 434 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 TRIM3O75382 744 aaPredicted RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 BCAS2O75934 225 aaPredicted RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 CT62P0C5K7 136 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 KRT15P19012 456 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 NT5EP21589 574 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 GPX3P22352 226 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 SSTR4P31391 388 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 PIGAP37287 484 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 MAGEA5P43359 124 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 DNASE1L1P49184 302 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 NR0B1P51843 470 aaKnown RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 KCNJ2P63252 427 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 MGAT2Q10469 447 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 CEBPEQ15744 281 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 EMC4Q5J8M3 183 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 FRMD7Q6ZUT3 714 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 TRIM46Q7Z4K8 759 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 RIBC1Q8N443 379 aaPredicted RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 ACBD4Q8NC06 268 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 OR10G3Q8NGC4 313 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 UBLCP1Q8WVY7 318 aaPredicted RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 SARAFQ96BY9 339 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 KLHL29Q96CT2 875 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 HSPBAP1Q96EW2 488 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 ANGPTL4Q9BY76 406 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 ACPTQ9BZG2 426 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 ZNF703Q9H7S9 590 aaPredicted RBP10.89□□□□□ -0.67
VRK1-204ENST00000555351 PROK2Q9HC23 129 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 MKS1Q9NXB0 559 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 MAT2BQ9NZL9 334 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 B4GALT7Q9UBV7 327 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 PRODH2Q9UF12 536 aa10.89□□□□□ -0.67
VRK1-204ENST00000555351 CRYBG3Q68DQ2 2970 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 NBPF19A0A087WUL8 3843 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 A0A1W2PS29 197 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 FAM47E-STBD1D6RA91 191 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 NPIPB8E9PQR5 432 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 G3V3Y1 287 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 PCDH7O60245 1069 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 WDR1O75083 606 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
VRK1-204ENST00000555351 SLITRK5O94991 958 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 SHBGP04278 402 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 DRD5P21918 477 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 ACVR2AP27037 513 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 TIA1P31483 386 aaKnown RBP eCLIP10.88□□□□□ -0.67
VRK1-204ENST00000555351 PPICP45877 212 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 MAN2A2P49641 1150 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 RAE1P78406 368 aaKnown RBP10.88□□□□□ -0.67
VRK1-204ENST00000555351 SLC18A2Q05940 514 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 SNTA1Q13424 505 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 TCHHL1Q5QJ38 904 aaPredicted RBP10.88□□□□□ -0.67
VRK1-204ENST00000555351 TMEM198Q66K66 360 aa10.88□□□□□ -0.67
VRK1-204ENST00000555351 RNF165Q6ZSG1 346 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms