RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PRKRAO75569 313 aaKnown RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 SIX3O95343 332 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 WISP3O95389 354 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ABCB1P08183 1280 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 RHOXF2BP0C7M4 288 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 CD8BP10966 210 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ALOX15P16050 662 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ABCD3P28288 659 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 GALNSP34059 522 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 GGT5P36269 586 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 CASP2P42575 452 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 HNMTP50135 292 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 HNRNPH2P55795 449 aaKnown RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 B3GALT5-AS1P59052 145 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 VEZF1Q14119 521 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 C18orf63Q68DL7 685 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 SLC29A4Q7RTT9 530 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 TRIM42Q8IWZ5 723 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 C17orf47Q8NEP4 570 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ZNF473Q8WTR7 871 aaKnown RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 RNF138Q8WVD3 245 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ROBO4Q8WZ75 1007 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 CCT6BQ92526 530 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ART5Q96L15 291 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 TBCDQ9BTW9 1192 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 TRIM54Q9BYV2 358 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 SLCO5A1Q9H2Y9 848 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 COPS7BQ9H9Q2 264 aaPredicted RBP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 SERHLQ9NQF3 203 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 YAE1D1Q9NRH1 226 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRKCH-208ENST00000553846 ELOVL5Q9NYP7 299 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 GPRC5BQ9NZH0 403 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 OARD1Q9Y530 152 aa8.19□□□□□ -1.1
PRKCH-208ENST00000553846 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 GNB5O14775 395 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 WDR47O94967 919 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 AIFM1O95831 613 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 IGHV4-39P01824 125 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 SOD3P08294 240 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 CT62P0C5K7 136 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 S1PR1P21453 382 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 SSTR4P31391 388 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 HPDP32754 393 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ACVR1BP36896 505 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 MASP1P48740 699 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 STARP49675 285 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 SRSF2Q01130 221 aaKnown RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 TNFRSF17Q02223 184 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 GPS1Q13098 491 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 BIKQ13323 160 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 DOC2AQ14183 400 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ZNF267Q14586 743 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 BEX5Q5H9J7 111 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ADAM5Q6NVV9 412 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ANGPTL8Q6UXH0 198 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 TAGAPQ8N103 731 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 KRT78Q8N1N4 520 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 NAT8LQ8N9F0 302 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 C7orf57Q8NEG2 295 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ANKRD49Q8WVL7 239 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 UCN3Q969E3 161 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ZBED6CLQ96FA7 236 aaPredicted RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 PGM2Q96G03 612 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 VPS39Q96JC1 886 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 NODALQ96S42 347 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 SORBS1Q9BX66 1292 aaKnown RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ROGDIQ9GZN7 287 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 RBSNQ9H1K0 784 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 RPF2Q9H7B2 306 aaKnown RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 RNF122Q9H9V4 155 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 CXorf21Q9HAI6 301 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 GALNT9Q9HCQ5 603 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 SNX15Q9NRS6 342 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 CDC42EP3Q9UKI2 254 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 EXO1Q9UQ84 846 aaKnown RBP8.18□□□□□ -1.1
PRKCH-208ENST00000553846 FREM1Q5H8C1 2179 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 ALPK2Q86TB3 2170 aa8.18□□□□□ -1.1
PRKCH-208ENST00000553846 IQANK1A0A1B0GTG1 560 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 C2orf92A0A1B0GVN3 265 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 ANKDD1BA6NHY2 528 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 GOLGA8MH3BSY2 632 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 EMC8O43402 210 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 KCNAB3O43448 404 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 GPRIN2O60269 458 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 ZIC3O60481 467 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 ICOSLGO75144 302 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 NDUFS7O75251 213 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 CDH16O75309 829 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
PRKCH-208ENST00000553846 GPR75O95800 540 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 POU2F1P14859 743 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 GPX3P22352 226 aa8.17□□□□□ -1.1
PRKCH-208ENST00000553846 CPN2P22792 545 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms