RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 IFNEQ86WN2 208 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 ACOT4Q8N9L9 421 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 KCNC2Q96PR1 638 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 OR2B2Q9GZK3 357 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 ROGDIQ9GZN7 287 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 SERHLQ9NQF3 203 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 HEY2Q9UBP5 337 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 DTX4Q9Y2E6 619 aa12.47□□□□□ -0.41
PRPF39-204ENST00000553605 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 EMC8O43402 210 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 NDUFS7O75251 213 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 CBR3O75828 277 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 PGRP06401 933 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 THBS1P07996 1170 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 DANCRP0C864 163 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ZNF708P17019 499 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ATP5A1P25705 553 aaKnown RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 CFPP27918 469 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 CLDN18P56856 261 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 NRG3P56975 720 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 VLDLRP98155 873 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 HLA-DQA1Q5Y7H0 255 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ADNP2Q6IQ32 1131 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ADAM5Q6NVV9 412 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 CHMP1BQ7LBR1 199 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 UBE3DQ7Z6J8 389 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ST13P4Q8IZP2 240 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ARIH2OSQ8N7S6 290 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 LILRB1Q8NHL6 650 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 RIT1Q92963 219 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ESRP2Q9H6T0 727 aaKnown RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 RPF2Q9H7B2 306 aaKnown RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 METTL7AQ9H8H3 244 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 ACTR8Q9H981 624 aa12.46□□□□□ -0.41
PRPF39-204ENST00000553605 EXO1Q9UQ84 846 aaKnown RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 MAGED1Q9Y5V3 778 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-204ENST00000553605 IGHV4-30-2A0A087WSY4 118 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 A0A096LNT2 108 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 RTCAO00442 366 aaKnown RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 UBFD1O14562 309 aaKnown RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 ICOSLGO75144 302 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 FTCDO95954 541 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 CLPSP04118 112 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 TERF1P54274 439 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 EXOC3L2Q2M3D2 409 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 HSP90AA5PQ58FG0 334 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 RBM20Q5T481 1227 aaKnown RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 CYB5R2Q6BCY4 276 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 PRR22Q8IZ63 422 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 SYCE1Q8N0S2 351 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 SRFBP1Q8NEF9 429 aaKnown RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 SMAP2Q8WU79 429 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 ANKRD7Q92527 254 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 TANKQ92844 425 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 FBXW5Q969U6 566 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 TBCDQ9BTW9 1192 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 PITHD1Q9GZP4 211 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 LACRTQ9GZZ8 138 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 BARX1Q9HBU1 254 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 TAS2R10Q9NYW0 307 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 ZNF490Q9ULM2 529 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-204ENST00000553605 PROCRQ9UNN8 238 aa12.45□□□□□ -0.42
PRPF39-204ENST00000553605 FAM234BA2RU67 622 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SDR42E2A6NKP2 422 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SSX4O60224 188 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 OR10H2O60403 315 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 LMX1BO60663 402 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 WDR47O94967 919 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 ABCB1P08183 1280 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 RHOXF2BP0C7M4 288 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 KRT15P19012 456 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 HIST1H1TP22492 207 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 GDF5P43026 501 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 RPS13P62277 151 aaKnown RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 LOXL1Q08397 574 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 FGFBP1Q14512 234 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SEL1L2Q5TEA6 688 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 GSTA5Q7RTV2 222 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 RAB3IL1Q8TBN0 382 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 RHBDF1Q96CC6 855 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SFXN2Q96NB2 322 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 EGFL8Q99944 293 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 PELOQ9BRX2 385 aaKnown RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 FAM167BQ9BTA0 163 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms