RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 THSD1Q9NS62 852 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 SPATA6Q9NWH7 488 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF224Q9NZL3 707 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 RABL2AQ9UBK7 228 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 CLEC4EQ9ULY5 219 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 SATB2Q9UPW6 733 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 YIPF1Q9Y548 306 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 TP53BP1Q12888 1972 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 F5P12259 2224 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 A0A1W2PQ45 241 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 A0A1W2PQY0 241 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 CD8B2A6NJW9 211 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 FADS2P1A8MWK0 482 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 NPIPB8E9PQR5 432 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 OR10H3O60404 316 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 RFPL3O75679 317 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 INHAP05111 366 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 OR56A5P0C7T3 313 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 CD8BP10966 210 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 PEPDP12955 493 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 JUPP14923 745 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 HOXB6P17509 224 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ELAVL4P26378 380 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 BMP8BP34820 402 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 BDKRB1P46663 353 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 PCBP3P57721 371 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 RPS13P62277 151 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 TEKQ02763 1124 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 C2orf80Q0P641 193 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 MAP4K2Q12851 820 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 FZD5Q13467 585 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 EXOSC2Q13868 293 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 NCF4Q15080 339 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 AANATQ16613 207 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 GGTA1PQ4G0N0 100 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF697Q5TEC3 545 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF57Q68EA5 555 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 C12orf73Q69YU5 71 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 TNFAIP8L2Q6P589 184 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 BMP8AQ7Z5Y6 402 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ADCK2Q7Z695 626 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 LRRTM4Q86VH4 590 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 COMMD7Q86VX2 200 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 NPAS4Q8IUM7 802 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 TAGAPQ8N103 731 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 WDR48Q8TAF3 677 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 LINC01599Q8WXQ3 324 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 FGF11Q92914 225 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 WBP1Q96G27 269 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ZC3HAV1LQ96H79 300 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 KCTD7Q96MP8 289 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 RBP7Q96R05 134 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 MRPL9Q9BYD2 267 aaKnown RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 SPNS1Q9H2V7 528 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 ANKRA2Q9H9E1 313 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 C5AR2Q9P296 337 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 AUP1Q9Y679 476 aa4.6□□□□□ -1.67
LIMA1-214ENST00000552783 KIF26AQ9ULI4 1882 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-214ENST00000552783 MYOFQ9NZM1 2061 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 PCP4L1A6NKN8 68 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 G3V3Q6 166 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 CASKO14936 926 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 PI15O43692 258 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 B4GALT2O60909 372 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 FCER2P06734 321 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 HOXD4P09016 255 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 OSMP13725 252 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 LHCGRP22888 699 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 MAPK1P28482 360 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 SPAM1P38567 509 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 XKP51811 444 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 SNRPGP62308 76 aaKnown RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 BNC1Q01954 994 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 TAGLNQ01995 201 aaKnown RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 CSTF1Q05048 431 aaKnown RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 RING1Q06587 406 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 CRYZQ08257 329 aaKnown RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 RPA4Q13156 261 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 BTN1A1Q13410 526 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 NAE1Q13564 534 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 PLK5Q496M5 336 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 GCNT6Q5T4J0 391 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 TYW3Q6IPR3 259 aaKnown RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 PGBD2Q6P3X8 592 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 CERS6Q6ZMG9 384 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 DEF8Q6ZN54 512 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 MSANTD1Q6ZTZ1 278 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 Q6ZVU0 165 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 USP45Q70EL2 814 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF784Q8NCA9 323 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 OR4F15Q8NGB8 312 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 ZFPM2Q8WW38 1151 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 AKAP1Q92667 903 aaKnown RBP eCLIP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 UCN3Q969E3 161 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 TMEM159Q96B96 161 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 KLHL15Q96M94 604 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 LINC00052Q96N35 136 aa4.59□□□□□ -1.67
LIMA1-214ENST00000552783 ZNF582Q96NG8 517 aaPredicted RBP4.59□□□□□ -1.67
LIMA1-214ENST00000552783 SMAD5Q99717 465 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms