RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	NEDD8	Q15843	81 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRAMEF8	Q5VWM4	474 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRAMEF7	Q5VXH5	474 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	BHLHB9	Q6PI77	547 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM111B	Q6SJ93	734 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	B3GNT6	Q6ZMB0	384 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ABHD13	Q7L211	337 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	B3GNT8	Q7Z7M8	397 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	TMEFF1	Q8IYR6	380 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	GALNT15	Q8N3T1	639 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	CSNK1A1L	Q8N752	337 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR7G2	Q8NG99	324 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	RASSF5	Q8WWW0	418 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PROX1	Q92786	737 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	KAT2A	Q92830	837 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	RERG	Q96A58	199 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	HRASLS5	Q96KN8	279 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	DHRS1	Q96LJ7	313 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF354B	Q96LW1	612 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	NIPSNAP1	Q9BPW8	284 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	TREX2	Q9BQ50	279 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	WFDC6	Q9BQY6	131 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SEMA6C	Q9H3T2	930 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	IL21R	Q9HBE5	538 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	LYRM4	Q9HD34	91 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM60A	Q9NP50	221 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRDM9	Q9NQV7	894 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	NTM	Q9P121	344 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	RHCG	Q9UBD6	479 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	AASS	Q9UDR5	926 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SEC14L3	Q9UDX4	400 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	BLOC1S6	Q9UL45	172 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	POFUT2	Q9Y2G5	429 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM32A	Q9Y421	112 aa	Known RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF780B	Q9Y6R6	833 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ABCA7	Q8IZY2	2146 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	COL5A1	P20908	1838 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	TRBV4-1	A0A0J9YWV2	114 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	LILRA5	A6NI73	299 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ENO4	A6NNW6	628 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM227A	F5H4B4	570 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338		M0R3H8	397 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZSCAN9	O15535	394 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ASNA1	O43681	348 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	XPNPEP2	O43895	674 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	GALR3	O60755	368 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	CCNB2	O95067	398 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	EIF2S1	P05198	315 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF10	P21506	573 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	EEF1B2	P24534	225 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	GGT2	P36268	569 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	FASLG	P48023	281 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	CXCR4	P61073	352 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	RPP38	P78345	283 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	SHC2	P98077	582 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	PIGF	Q07326	219 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	COL9A2	Q14055	689 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	DEFB110	Q30KQ9	67 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	EXOSC6	Q5RKV6	272 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	MANEA	Q5SRI9	462 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	XAF1	Q6GPH4	301 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	TCTN3	Q6NUS6	607 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	MFSD12	Q6NUT3	480 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	GPR153	Q6NV75	609 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	DEF8	Q6ZN54	512 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338		Q6ZPB1	254 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	USP53	Q70EK8	1073 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF438	Q7Z4V0	828 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	IQCH	Q86VS3	1027 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	RBM45	Q8IUH3	476 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR4N5	Q8IXE1	308 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	SPART	Q8N0X7	666 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	CA13	Q8N1Q1	262 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ARL14	Q8N4G2	192 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ARHGEF39	Q8N4T4	335 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF655	Q8N720	491 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	C19orf47	Q8N9M1	422 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	TMEM52	Q8NDY8	209 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR4K14	Q8NGD5	310 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZFAND2B	Q8WV99	257 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	APH1B	Q8WW43	257 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	MPP4	Q96JB8	637 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	MS4A4E	Q96PG1	132 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ALPK1	Q96QP1	1244 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	APOL4	Q9BPW4	351 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	TUBA1C	Q9BQE3	449 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	FUZ	Q9BT04	418 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ACTRT3	Q9BYD9	372 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	C3orf14	Q9HBI5	128 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	EQTN	Q9NQ60	294 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	MS4A12	Q9NXJ0	267 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	WNT16	Q9UBV4	365 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	ACAD8	Q9UKU7	415 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	PSME2	Q9UL46	239 aa		10.81	□□□□□ -0.68
RAB5C-208	ENST00000551338	COLQ	Q9Y215	455 aa	Predicted RBP	10.81	□□□□□ -0.68

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