RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KRTAP1-3Q8IUG1 177 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GCNT2Q8N0V5 402 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PDIK1LQ8N165 341 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 NKAPQ8N5F7 415 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 TEX9Q8N6V9 391 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 C9orf106Q8NAJ2 232 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 MORN4Q8NDC4 146 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 OR7G3Q8NG95 312 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 ACTRT1Q8TDG2 376 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GRK7Q8WTQ7 553 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 KCTD4Q8WVF5 259 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GATAD2BQ8WXI9 593 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 DIO2Q92813 273 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 NXNL1Q96CM4 212 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 RMND5BQ96G75 393 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 TRIB1Q96RU8 372 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 TIMP4Q99727 224 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 MCMBPQ9BTE3 642 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 NPLQ9BXD5 320 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 WWTR1Q9GZV5 400 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 GALNT9Q9HCQ5 603 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SH2D2AQ9NP31 389 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 ZFP64Q9NPA5 681 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SAYSD1Q9NPB0 183 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 DLL4Q9NR61 685 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 TEX10Q9NXF1 929 aaPredicted RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 MOCS1Q9NZB8 636 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 PTBP2Q9UKA9 531 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 CNOT11Q9UKZ1 510 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 RNF112Q9ULX5 631 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 MRPS33Q9Y291 106 aaKnown RBP6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 ATRQ13535 2644 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 ARHGAP21Q5T5U3 1957 aa6.26□□□□□ -1.41
PRPF40B-214ENST00000551320 SONP18583 2426 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 GOLGA6L10A0A0M3HER8 536 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 FOXO6A8MYZ6 492 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SEC31AO94979 1220 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ATE1O95260 518 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SIX3O95343 332 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 AIFM1O95831 613 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 BMP7P18075 431 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 TSPAN8P19075 237 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 DNASE1P24855 282 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CNTFP26441 200 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 PCSK6P29122 969 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 STT3AP46977 705 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 RAP1GDS1P52306 607 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 NAGLUP54802 743 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC12A2P55011 1212 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ARL4CP56559 192 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SLC37A1P57057 533 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ID3Q02535 119 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CRYZQ08257 329 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SLMAPQ14BN4 828 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 MORF4L2Q15014 288 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SGO1Q5FBB7 561 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 NDUFAF5Q5TEU4 345 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 KHDRBS2Q5VWX1 349 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ANKRD34AQ69YU3 496 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 OR4C11Q6IEV9 310 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 LRFN4Q6PJG9 635 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 FAM111BQ6SJ93 734 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 Q6ZS46 218 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ADAMTSL2Q86TH1 951 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CCDC25Q86WR0 208 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CREG2Q8IUH2 290 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CTAGE3PQ8IX95 158 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 EID3Q8N140 333 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 C17orf53Q8N3J3 647 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 LIX1Q8N485 282 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 PPM1NQ8N819 430 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ADCY4Q8NFM4 1077 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 GOT1L1Q8NHS2 421 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 HUS1BQ8NHY5 278 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 FBXO27Q8NI29 283 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 NEIL3Q8TAT5 605 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 PAQR8Q8TEZ7 354 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SARAFQ96BY9 339 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SPACA9Q96E40 222 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 PTCD3Q96EY7 689 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 PLPPR2Q96GM1 343 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 EAF1Q96JC9 268 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 RILPQ96NA2 401 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 FOXC2Q99958 501 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 DOHHQ9BU89 302 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ZNF717Q9BY31 904 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 UGT2B28Q9BY64 529 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CD244Q9BZW8 370 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 DERL2Q9GZP9 239 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 CXXC4Q9H2H0 198 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 RHOJQ9H4E5 214 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 RPF2Q9H7B2 306 aaKnown RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 SERHLQ9NQF3 203 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 C6orf203Q9P0P8 240 aaPredicted RBP6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 COPS7AQ9UBW8 275 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 RNF11Q9Y3C5 154 aa6.25□□□□□ -1.41
PRPF40B-214ENST00000551320 ASB4Q9Y574 426 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms