RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FEN1P39748 380 aaKnown RBP15.02■□□□□ -0
VPS29-207ENST00000549970 FBXW4P57775 412 aa15.02■□□□□ -0
VPS29-207ENST00000549970 SLC29A2Q14542 456 aa15.02■□□□□ -0
VPS29-207ENST00000549970 RASA2Q15283 850 aa15.02■□□□□ -0
VPS29-207ENST00000549970 SLC48A1Q6P1K1 146 aa15.02■□□□□ -0
VPS29-207ENST00000549970 CCDC71Q8IV32 467 aaPredicted RBP15.02■□□□□ -0
VPS29-207ENST00000549970 C1orf52Q8N6N3 182 aaKnown RBP15.02■□□□□ -0
VPS29-207ENST00000549970 ZNF615Q8N8J6 731 aa15.02■□□□□ -0
VPS29-207ENST00000549970 DIO2Q92813 273 aa15.02■□□□□ -0
VPS29-207ENST00000549970 TM4SF18Q96CE8 201 aa15.02■□□□□ -0
VPS29-207ENST00000549970 DOHHQ9BU89 302 aa15.02■□□□□ -0
VPS29-207ENST00000549970 BRINP2Q9C0B6 783 aa15.02■□□□□ -0
VPS29-207ENST00000549970 NMRK1Q9NWW6 199 aa15.02■□□□□ -0
VPS29-207ENST00000549970 PSMC3IPQ9P2W1 217 aaPredicted RBP15.02■□□□□ -0
VPS29-207ENST00000549970 TBK1Q9UHD2 729 aa15.02■□□□□ -0
VPS29-207ENST00000549970 CES1P1Q9UKY3 287 aa15.02■□□□□ -0
VPS29-207ENST00000549970 CNOT11Q9UKZ1 510 aaKnown RBP15.02■□□□□ -0
VPS29-207ENST00000549970 TRGV5A0A0B4J1U4 118 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 GOLGA6L10A6NI86 522 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 LRRC3CA6NJW4 275 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 CAPN14A8MX76 684 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 MANBAO00462 879 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 TP53I11O14683 189 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 SUSD5O60279 629 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 KRT6AP02538 564 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 KRT6BP04259 564 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 PYGBP11216 843 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ATP5F1P24539 256 aaPredicted RBP15.01□□□□□ -0.01
VPS29-207ENST00000549970 ACVR2AP27037 513 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 HMOX2P30519 316 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 KRT6CP48668 564 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ALDH9A1P49189 494 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 RPS6KA2Q15349 733 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 BICRALQ6AI39 1079 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 FAM180BQ6P0A1 224 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 FAM111BQ6SJ93 734 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 GPRIN3Q6ZVF9 776 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ACAD11Q709F0 780 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 LCA5Q86VQ0 697 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 PRR22Q8IZ63 422 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ZNF295-AS1Q8N0V1 137 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 VWA5B2Q8N398 1253 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ADIPOR1Q96A54 375 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 TP53INP1Q96A56 240 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 SARAFQ96BY9 339 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 KLHL29Q96CT2 875 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 ZNF382Q96SR6 550 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 UCK2Q9BZX2 261 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 RYDENQ9NUL5 291 aaKnown RBP15.01□□□□□ -0.01
VPS29-207ENST00000549970 ALKBH4Q9NXW9 302 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 SPRR3Q9UBC9 169 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 VPS29Q9UBQ0 182 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 NPFFR2Q9Y5X5 522 aa15.01□□□□□ -0.01
VPS29-207ENST00000549970 NKX2-6A6NCS4 301 aa15□□□□□ -0.01
VPS29-207ENST00000549970 HCN1O60741 890 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ESRRBO95718 433 aa15□□□□□ -0.01
VPS29-207ENST00000549970 FREM3P0C091 2139 aa15□□□□□ -0.01
VPS29-207ENST00000549970 HSD3B1P14060 373 aa15□□□□□ -0.01
VPS29-207ENST00000549970 CHN1P15882 459 aa15□□□□□ -0.01
VPS29-207ENST00000549970 IMPDH1P20839 514 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ENDOUP21128 410 aaKnown RBP15□□□□□ -0.01
VPS29-207ENST00000549970 HSD3B2P26439 372 aa15□□□□□ -0.01
VPS29-207ENST00000549970 TMED10P49755 219 aaKnown RBP15□□□□□ -0.01
VPS29-207ENST00000549970 HTR6P50406 440 aa15□□□□□ -0.01
VPS29-207ENST00000549970 NRG3P56975 720 aa15□□□□□ -0.01
VPS29-207ENST00000549970 NNATQ16517 81 aa15□□□□□ -0.01
VPS29-207ENST00000549970 PRICKLE4Q2TBC4 344 aa15□□□□□ -0.01
VPS29-207ENST00000549970 WLSQ5T9L3 541 aa15□□□□□ -0.01
VPS29-207ENST00000549970 B3GNT6Q6ZMB0 384 aa15□□□□□ -0.01
VPS29-207ENST00000549970 MEX3BQ6ZN04 569 aaKnown RBP15□□□□□ -0.01
VPS29-207ENST00000549970 SLC22A9Q8IVM8 553 aa15□□□□□ -0.01
VPS29-207ENST00000549970 LRRC25Q8N386 305 aaPredicted RBP15□□□□□ -0.01
VPS29-207ENST00000549970 LRRN4CLQ8ND94 238 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ADCY4Q8NFM4 1077 aa15□□□□□ -0.01
VPS29-207ENST00000549970 OR7G1Q8NGA0 311 aa15□□□□□ -0.01
VPS29-207ENST00000549970 OR10Q1Q8NGQ4 319 aa15□□□□□ -0.01
VPS29-207ENST00000549970 LILRB4Q8NHJ6 448 aa15□□□□□ -0.01
VPS29-207ENST00000549970 METTL6Q8TCB7 284 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ACMSDQ8TDX5 336 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ZNF597Q96LX8 424 aa15□□□□□ -0.01
VPS29-207ENST00000549970 SPOCK3Q9BQ16 436 aa15□□□□□ -0.01
VPS29-207ENST00000549970 FAIM2Q9BWQ8 316 aa15□□□□□ -0.01
VPS29-207ENST00000549970 TXLNGYQ9BZA5 131 aa15□□□□□ -0.01
VPS29-207ENST00000549970 ENKD1Q9H0I2 346 aa15□□□□□ -0.01
VPS29-207ENST00000549970 SLC6A15Q9H2J7 730 aa15□□□□□ -0.01
VPS29-207ENST00000549970 EPB41L4BQ9H329 900 aa15□□□□□ -0.01
VPS29-207ENST00000549970 MAT2BQ9NZL9 334 aa15□□□□□ -0.01
VPS29-207ENST00000549970 B4GALT7Q9UBV7 327 aa15□□□□□ -0.01
VPS29-207ENST00000549970 BCAP29Q9UHQ4 241 aa15□□□□□ -0.01
VPS29-207ENST00000549970 DTX4Q9Y2E6 619 aa15□□□□□ -0.01
VPS29-207ENST00000549970 FAM215AQ9Y5M1 114 aa15□□□□□ -0.01
VPS29-207ENST00000549970 INTS1Q8N201 2190 aaKnown RBP15□□□□□ -0.01
VPS29-207ENST00000549970 ULK1O75385 1050 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 ATP1B1P05026 303 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 KRT15P19012 456 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 CSNK2A2P19784 350 aaPredicted RBP14.99□□□□□ -0.01
VPS29-207ENST00000549970 S1PR1P21453 382 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 GPX3P22352 226 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 GDF1P27539 372 aa14.99□□□□□ -0.01
VPS29-207ENST00000549970 TRPC1P48995 793 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms