RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ELAVL4P26378 380 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 MAN2A2P49641 1150 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 MRPS15P82914 257 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 C1DQ13901 141 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 INSL4Q14641 139 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 DEFB134Q4QY38 66 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 CRTC2Q53ET0 693 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 TOR1AIP1Q5JTV8 583 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 C6orf183Q5T699 404 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM131AQ6UXB0 335 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 LYSMD2Q8IV50 215 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 LAX1Q8IWV1 398 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 BTN3A3O00478 584 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 PLD2O14939 933 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 LILRB5O75023 590 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 TMCC2O75069 709 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 SEMG1P04279 462 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 IL1RNP18510 177 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 MYL12AP19105 171 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 FUT1P19526 365 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 ACADLP28330 430 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 COPZ1P61923 177 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 TBCEQ15813 527 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 ACSM5Q6NUN0 579 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 HSDL2Q6YN16 418 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF793Q6ZN11 406 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 RAB42Q8N4Z0 105 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 FBXL6Q8N531 539 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 CCL4L1Q8NHW4 92 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 HDHD5Q9BXW7 423 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 MS4A8Q9BY19 250 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 KLHL3Q9UH77 587 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC9A8Q9Y2E8 581 aa12.92□□□□□ -0.34
PRPF40B-209ENST00000548825 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 FOXE1O00358 373 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 AP3D1O14617 1153 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ASNA1O43681 348 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 UPK1BO75841 260 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 CXCR2P25025 360 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 OPRD1P41143 372 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF91Q05481 1191 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 RBBP4Q09028 425 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PDGFRLQ15198 375 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM214AQ32MH5 1076 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PLAG1Q6DJT9 500 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM92BQ6ZTR7 304 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 TRIM48Q8IWZ4 208 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 LAS2Q8IYD9 372 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF557Q8N988 423 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 KLHL6Q8WZ60 621 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF514Q96K75 400 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 RSPO3Q9BXY4 272 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 SIAEQ9HAT2 523 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 TRANK1O15050 2925 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 A0A1W2PQU0 124 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 METTL15A6NJ78 407 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 HAT1O14929 419 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 AQP9O43315 295 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 GMFGO60234 142 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 NCR1O76036 304 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 BSGP35613 385 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 DUSP2Q05923 314 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 IRF4Q15306 451 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 OR4C11Q6IEV9 310 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 AKAP14Q86UN6 197 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 DIRAS2Q96HU8 199 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PITX2Q99697 317 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 MMP27Q9H306 513 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 BOLA1Q9Y3E2 137 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 CFAP54Q96N23 3096 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 FCMRO60667 390 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 SNRNP200O75643 2136 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 CCNKO75909 580 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ASGR2P07307 311 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 SRPRAP08240 638 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 CHRNEQ04844 493 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 OR5K2Q8NHB8 316 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZFPM2Q8WW38 1151 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 TRMT61AQ96FX7 289 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 NEDD4LQ96PU5 975 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 GPA33Q99795 319 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PLA2G12AQ9BZM1 189 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 MMP28Q9H239 520 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms