RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 KLF8O95600 359 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 OXSR1O95747 527 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 PPP2R1BP30154 601 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 GRK5P34947 590 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 ILKQ13418 452 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 TPRG1LQ5T0D9 272 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 PGBD2Q6P3X8 592 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 TMEM107Q6UX40 140 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 LINC00299Q6ZSB3 139 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SLC46A3Q7Z3Q1 461 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 CENPSQ8N2Z9 138 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 FAM46DQ8NEK8 389 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 ZHX1-C8orf76Q96EF9 292 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 C16orf58Q96GQ5 468 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 FCRL4Q96PJ5 515 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 KCNE3Q9Y6H6 103 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 COLEC10Q9Y6Z7 277 aa17.48■□□□□ 0.39
PRPF40B-208ENST00000548436 SH3D21A4FU49 640 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 CHRM5P08912 532 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 F3P13726 295 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 SERPINB10P48595 397 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 DLX2Q07687 328 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 ATP1A4Q13733 1029 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 SLC48A1Q6P1K1 146 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 ENPP7Q6UWV6 458 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 DGLUCYQ7Z3D6 616 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 AMIGO1Q86WK6 493 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 KRT73Q86Y46 540 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 OR6Q1Q8NGQ2 317 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 CCL4L1Q8NHW4 92 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 SFXN5Q8TD22 340 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 CHPT1Q8WUD6 406 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 LCN9Q8WX39 176 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 COX4I2Q96KJ9 171 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 S1PR5Q9H228 398 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 FBXO8Q9NRD0 319 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 CLEC1BQ9P126 229 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 SCN2AQ99250 2005 aa17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 ARHGEF17Q96PE2 2063 aaPredicted RBP17.47■□□□□ 0.39
PRPF40B-208ENST00000548436 PROM1O43490 865 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 MPZL2O60487 215 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 GUCY1B2O75343 617 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 ASGR2P07307 311 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 CLK1P49759 484 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 ARFIP1P53367 373 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 SNRPNP63162 240 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 RD3Q7Z3Z2 195 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 WDR53Q7Z5U6 358 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 MFSD4AQ8N468 514 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 IL4I1Q96RQ9 567 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 WDR12Q9GZL7 423 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 DCSTAMPQ9H295 470 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 ANKRA2Q9H9E1 313 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 BCL2L10Q9HD36 194 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 TBCCD1Q9NVR7 557 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 CLN6Q9NWW5 311 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 ZNF624Q9P2J8 865 aaPredicted RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 ENTPD4Q9Y227 616 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 CEP290O15078 2479 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 TLR4O00206 839 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 BTN3A3O00478 584 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 TPST2O60704 377 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 BMP4P12644 408 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 PSMD7P51665 324 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 UGT2B15P54855 530 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 KCT2Q8NC54 265 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 OR6T1Q8NGN1 323 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 BBS10Q8TAM1 723 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 SNRNP27Q8WVK2 155 aaKnown RBP17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 OR6C2Q9NZP2 312 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 KLF15Q9UIH9 416 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 SNX7Q9UNH6 387 aa17.46■□□□□ 0.39
PRPF40B-208ENST00000548436 TRBV23OR9-2A0A075B6M9 112 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 EFCAB10A6NFE3 127 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 ENTPD6O75354 484 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 UGT2B17O75795 530 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 LGI1O95970 557 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 TP53P04637 393 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 SLC15A1P46059 708 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 KIAA1024LP59773 190 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 TARDBPQ13148 414 aaKnown RBP eCLIP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 ARMCX4Q5H9R4 360 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 SLX4IPQ5VYV7 408 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 PODNL1Q6PEZ8 512 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 VN1R4Q7Z5H5 301 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 PAQR7Q86WK9 346 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 SRFBP1Q8NEF9 429 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 S100ZQ8WXG8 99 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 TSACCQ96A04 125 aaPredicted RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 SIPA1Q96FS4 1042 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 CDCA4Q9BXL8 241 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 QRSL1Q9H0R6 528 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 POLR2J3Q9H1A7 115 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 SLC25A19Q9HC21 320 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 MAN2C1Q9NTJ4 1040 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 CNOT2Q9NZN8 540 aaKnown RBP17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 NDOR1Q9UHB4 597 aa17.45■□□□□ 0.38
PRPF40B-208ENST00000548436 A0A1W2PRQ8 180 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms