RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 MAGED4Q96JG8 741 aa26.89■■□□□ 1.9
BRF1-213ENST00000548421 IKZF5Q9H5V7 419 aa26.89■■□□□ 1.9
BRF1-213ENST00000548421 PNO1Q9NRX1 252 aaKnown RBP26.89■■□□□ 1.9
BRF1-213ENST00000548421 ZCCHC3Q9NUD5 404 aaKnown RBP26.89■■□□□ 1.9
BRF1-213ENST00000548421 DDX18Q9NVP1 670 aaKnown RBP26.89■■□□□ 1.9
BRF1-213ENST00000548421 CMTM6Q9NX76 183 aa26.89■■□□□ 1.9
BRF1-213ENST00000548421 CORO2BQ9UQ03 480 aa26.89■■□□□ 1.9
BRF1-213ENST00000548421 A0A087WV62 115 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 KRT75O95678 551 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 PGM1P36871 562 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 MAP4K2Q12851 820 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 FOXC1Q12948 553 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 ELAVL1Q15717 326 aaKnown RBP26.88■■□□□ 1.89
BRF1-213ENST00000548421 SAXO2Q658L1 398 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 FAM111BQ6SJ93 734 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 LANCL3Q6ZV70 420 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 VWA5B2Q8N398 1253 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 NEURL3Q96EH8 262 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 MMADHCQ9H3L0 296 aaPredicted RBP26.88■■□□□ 1.89
BRF1-213ENST00000548421 EPS8L2Q9H6S3 715 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 NTMQ9P121 344 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 AP3M1Q9Y2T2 418 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.88■■□□□ 1.89
BRF1-213ENST00000548421 AHCTF1Q8WYP5 2266 aa26.88■■□□□ 1.89
BRF1-213ENST00000548421 NME4O00746 187 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 PLOD3O60568 738 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 CT62P0C5K7 136 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 TNNI3P19429 210 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 SOX18P35713 384 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 FOLR3P41439 243 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 VAC14Q08AM6 782 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 TP53BP2Q13625 1128 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 FAAH2Q6GMR7 532 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 ANGPTL8Q6UXH0 198 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 OR2L13Q8N349 312 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 PNPT1Q8TCS8 783 aaKnown RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 ZNF578Q96N58 590 aaPredicted RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 FAM117AQ9C073 453 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 THSD1Q9NS62 852 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 C17orf105B2RV13 164 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 C21orf140B9A014 251 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 UPK1AO00322 258 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 DYRK3O43781 588 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 C1QCP02747 245 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 RPS15P62841 145 aaKnown RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 TRMT12Q53H54 448 aaKnown RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 SAMD4BQ5PRF9 694 aaKnown RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 FHL5Q5TD97 284 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 GPR155Q7Z3F1 870 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 C6orf120Q7Z4R8 191 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 ANKRD37Q7Z713 158 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 NUP43Q8NFH3 380 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 TMEM121BQ9BXQ6 578 aaPredicted RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 RAD21L1Q9H4I0 556 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 C19orf25Q9UFG5 118 aaPredicted RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 C19orf53Q9UNZ5 99 aaPredicted RBP26.87■■□□□ 1.89
BRF1-213ENST00000548421 AK5Q9Y6K8 562 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 CLCA3PQ9Y6N3 262 aa26.87■■□□□ 1.89
BRF1-213ENST00000548421 BRINP1O60477 761 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 OR4D2P58180 307 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 TMEM205Q6UW68 189 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 OR52N2Q8NGI0 321 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 DOK4Q8TEW6 326 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 PTPMT1Q8WUK0 201 aaPredicted RBP26.86■■□□□ 1.89
BRF1-213ENST00000548421 NXPE2Q96DL1 559 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 ECSITQ9BQ95 431 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 KAT8Q9H7Z6 458 aaKnown RBP26.86■■□□□ 1.89
BRF1-213ENST00000548421 ANKRA2Q9H9E1 313 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 ZNF639Q9UID6 485 aa26.86■■□□□ 1.89
BRF1-213ENST00000548421 FARSAQ9Y285 508 aaKnown RBP26.86■■□□□ 1.89
BRF1-213ENST00000548421 UMODP07911 640 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 GPX2P18283 190 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 PGDP52209 483 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 PRKAG1P54619 331 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 DNASE1L3Q13609 305 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 PIGGQ5H8A4 983 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 FAM69BQ5VUD6 431 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 RNF130Q86XS8 419 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 OR14A16Q8NHC5 309 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 DAZLQ92904 295 aaKnown RBP26.85■■□□□ 1.89
BRF1-213ENST00000548421 CLPTM1LQ96KA5 538 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 MS4A4EQ96PG1 132 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 CNPPD1Q9BV87 410 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 GPR87Q9BY21 358 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 KLK13Q9UKR3 277 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 TCFL5Q9UL49 500 aa26.85■■□□□ 1.89
BRF1-213ENST00000548421 A8MUA0 341 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 PCDH17O14917 1159 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 DNAJA2O60884 412 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 DLSTP36957 453 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 EEFSECP57772 596 aaKnown RBP26.84■■□□□ 1.89
BRF1-213ENST00000548421 KCNJ2P63252 427 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 ZNF267Q14586 743 aaPredicted RBP26.84■■□□□ 1.89
BRF1-213ENST00000548421 RGNQ15493 299 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 SPATS1Q496A3 300 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 SFT2D3Q587I9 215 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.84■■□□□ 1.89
BRF1-213ENST00000548421 DTX1Q86Y01 620 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 ULK2Q8IYT8 1036 aa26.84■■□□□ 1.89
BRF1-213ENST00000548421 SLC35G5Q96KT7 338 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms