RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 STHQ8IWL8 128 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 FBXO16Q8IX29 292 aaPredicted RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 ARL14Q8N4G2 192 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 GLYATL1Q969I3 302 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 BIRC7Q96CA5 298 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 VSIG2Q96IQ7 327 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 SLC26A1Q9H2B4 701 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 COPS7BQ9H9Q2 264 aaPredicted RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 TIGARQ9NQ88 270 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 DDX28Q9NUL7 540 aaKnown RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 CLIP2Q9UDT6 1046 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 LRRK1Q38SD2 2015 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 A0A0U1RQK1 487 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 ZNF320A2RRD8 509 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 TRABD2BA6NFA1 517 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 FRG2CA6NGY1 282 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 EFCAB7A8K855 629 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 STX6O43752 255 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 GMNNO75496 209 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 PRAMEF12O95522 483 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 GOT2P00505 430 aaKnown RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 P0C879 139 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 LAMP1P11279 417 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 VCLP18206 1134 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 IL2RGP31785 369 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 FNTAP49354 379 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 SMSP52788 366 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 NDST1P52848 882 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 ROR1Q01973 937 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 GK2Q14410 553 aaPredicted RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 RHBDD2Q6NTF9 364 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 APOOLQ6UXV4 268 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 MOB2Q70IA6 237 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 KCTD9Q7L273 389 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 PIWIL3Q7Z3Z3 882 aaKnown RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 UBQLNLQ8IYU4 475 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 LINC00518Q8N0U6 118 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 OR6M1Q8NGM8 313 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 RNASE8Q8TDE3 154 aaKnown RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 JAKMIP1Q96N16 626 aaKnown RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 FUNDC2Q9BWH2 189 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 PNPLA3Q9NST1 481 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 ABCB8Q9NUT2 735 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 DNAJC11Q9NVH1 559 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 TEKT2Q9UIF3 430 aa1.6□□□□□ -2.15
CEP290-204ENST00000547926 LEF1Q9UJU2 399 aaPredicted RBP1.6□□□□□ -2.15
CEP290-204ENST00000547926 YJEFN3A6XGL0 299 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 FAM220BPB1ANY3 271 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 PSMA7O14818 248 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 HDAC3O15379 428 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 REC8O95072 547 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 FCER2P06734 321 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 WNT2P09544 360 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 UROSP10746 265 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 MBL2P11226 248 aaPredicted RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 ATP6V1B1P15313 513 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 CYP3A5P20815 502 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 IDSP22304 550 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 SNU13P55769 128 aaKnown RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 RPS4XP62701 263 aaKnown RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 TRADDQ15628 312 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 STXBP2Q15833 593 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 MICAQ29983 383 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 MPPE1Q53F39 396 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 MS4A13Q5J8X5 152 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 TCHHL1Q5QJ38 904 aaPredicted RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 RTL6Q6ICC9 239 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 CD164L2Q6UWJ8 174 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 GPR142Q7Z601 462 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 PRR22Q8IZ63 422 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 SIDT2Q8NBJ9 832 aaKnown RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 ZNF564Q8TBZ8 553 aaPredicted RBP1.59□□□□□ -2.15
CEP290-204ENST00000547926 OSBPL8Q9BZF1 889 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 NAPBQ9H115 298 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 ZWILCHQ9H900 591 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 MAGEF1Q9HAY2 307 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 IMPAD1Q9NX62 359 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 LIPT1Q9Y234 373 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 ATG4BQ9Y4P1 393 aa1.59□□□□□ -2.15
CEP290-204ENST00000547926 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.16
CEP290-204ENST00000547926 A0A0A6YYD4 124 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 H0Y9J4 135 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 TNFSF11O14788 317 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 SH2D1BO14796 132 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 GPAA1O43292 621 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 GJB5O95377 273 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 TGDSO95455 350 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 CENPBP07199 599 aaPredicted RBP1.58□□□□□ -2.16
CEP290-204ENST00000547926 MMP10P09238 476 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 TCF7P36402 384 aaPredicted RBP1.58□□□□□ -2.16
CEP290-204ENST00000547926 RGRP47804 291 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 HNRNPA3P51991 378 aaKnown RBP1.58□□□□□ -2.16
CEP290-204ENST00000547926 SLC7A2P52569 658 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 HERV-K104P63124 156 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 ZNF33BQ06732 778 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 ISXQ2M1V0 245 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 C2orf83Q53S99 150 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 PAN3Q58A45 887 aaKnown RBP1.58□□□□□ -2.16
CEP290-204ENST00000547926 TAF3Q5VWG9 929 aa1.58□□□□□ -2.16
CEP290-204ENST00000547926 CDC42EP5Q6NZY7 148 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms