RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 FAM227AF5H4B4 570 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TAF4O00268 1085 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF195O14628 629 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PCDH17O14917 1159 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 POLR3GO15318 223 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 DIAPH2O60879 1101 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PEX11AO75192 247 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 GUCY1B2O75343 617 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 VPS4BO75351 444 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 SEC22BO75396 215 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 CREG1O75629 220 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MYO1DO94832 1006 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 HEXBP07686 556 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 VIMP08670 466 aaKnown RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 IL3P08700 152 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ANXA4P09525 319 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 C8orf89P0DMQ9 161 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PRKAR1AP10644 381 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 CD247P20963 164 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MAOAP21397 527 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MMP11P24347 488 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TACR1P25103 407 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 EPHA3P29320 983 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PPP2R1BP30154 601 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TLX1P31314 330 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 OTX2P32243 289 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 HPCAL1P37235 193 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 HSD17B7P56937 341 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TMPRSS3P57727 454 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TAS2R50P59544 299 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TRA2BP62995 288 aaKnown RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ERVK-8P63133 956 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MC1RQ01726 317 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 RHAGQ02094 409 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 EEF1A2Q05639 463 aaKnown RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 SLC13A2Q13183 592 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MAD2L1Q13257 205 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ERV3-1Q14264 604 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PTGR1Q14914 329 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 KIAA0040Q15053 153 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 UGT8Q16880 541 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 SLC9B1Q4ZJI4 515 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 RFTN2Q52LD8 501 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 C6orf136Q5SQH8 315 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ATP1A1-AS1Q5TC04 95 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 NDUFAF5Q5TEU4 345 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 VWA5B1Q5TIE3 1220 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 C18orf63Q68DL7 685 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 LANCL3Q6ZV70 420 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MED25Q71SY5 747 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PPP1R32Q7Z5V6 425 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 CLNKQ7Z7G1 428 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF595Q8IYB9 648 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 LRRC34Q8IZ02 419 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MMP21Q8N119 569 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 CLHC1Q8NHS4 586 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ADAMTS17Q8TE56 1095 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 MAELQ96JY0 434 aaKnown RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 TSSK3Q96PN8 268 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 SIKE1Q9BRV8 207 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 FAIM2Q9BWQ8 316 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 WDR55Q9H6Y2 383 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ZNF552Q9H707 407 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 PRTFDC1Q9NRG1 225 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ASIC5Q9NY37 505 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 C19orf25Q9UFG5 118 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-211ENST00000546304 ASB4Q9Y574 426 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 HS3ST3B1Q9Y662 390 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 EXPH5Q8NEV8 1989 aa5.93□□□□□ -1.46
PRKDC-211ENST00000546304 GOLGA8QA0A0J9YX86 632 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 A0A1W2PQ72 361 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TCRBV16S1A1N1A0A5B0 115 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 C1orf226A1L170 272 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 GOLGA8OA6NCC3 632 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 SYNDIG1LA6NDD5 238 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 OR2W5A6NFC9 320 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 GLOD5A6NK44 160 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 GOLGA8NF8WBI6 632 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 K7ENP7 123 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 HRKO00198 91 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 CLDN4O14493 209 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 SOCS6O14544 535 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 PROM1O43490 865 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 FGF17O60258 216 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 LDB3O75112 727 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ALOX12BO75342 701 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TGDSO95455 350 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 IGHEP01854 428 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TP53P04637 393 aaPredicted RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ALDOCP09972 364 aaKnown RBP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 TROVE2P10155 538 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-211ENST00000546304 COX6A1P12074 109 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 BCKDHAP12694 445 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 LBPP18428 481 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 DDCP20711 480 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ITPKBP27987 946 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 LSP1P33241 339 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ASMTP46597 345 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 ALDH9A1P49189 494 aa5.92□□□□□ -1.46
PRKDC-211ENST00000546304 GYS2P54840 703 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms