RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TGM5O43548 720 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 IL7P13232 177 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MAGEA8P43361 318 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ZNF789Q5FWF6 425 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DCDC5Q6ZRR9 648 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 SGCDQ92629 289 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 PINK1Q9BXM7 581 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ZFR2Q9UPR6 939 aaKnown RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 CARD8Q9Y2G2 431 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 HEPACAM2A8MVW5 462 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 RBBP9O75884 186 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 CLRN1P58418 232 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 SLC5A8Q8N695 610 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 OR6N1Q8NGY5 312 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 RPLP0P6Q8NHW5 317 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 NRG4Q8WWG1 115 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 SERINC2Q96SA4 455 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 FANCFQ9NPI8 374 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 RXFP3Q9NSD7 469 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DKKL1Q9UK85 242 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 FRKP42685 505 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MTNR1AP48039 350 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 PGGT1BP53609 377 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 AP2S1P53680 142 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 SPRED3Q2MJR0 410 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MARCH8Q5T0T0 291 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 RNF111Q6ZNA4 994 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 GPAT4Q86UL3 456 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ASCC1Q8N9N2 400 aaKnown RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 C8orf33Q9H7E9 229 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MLXQ9UH92 298 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 SLCO3A1Q9UIG8 710 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ENPP5Q9UJA9 477 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 CPED1A4D0V7 1026 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 PCDH17O14917 1159 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DNAJB6O75190 326 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 RP2O75695 350 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 PAK4O96013 591 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DDCP20711 480 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TCEA1P23193 301 aaKnown RBP11.93□□□□□ -0.5
COL4A6-209ENST00000545689 PTGS2P35354 604 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 GMPRP36959 345 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MLLT10P55197 1068 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 CDK5R2Q13319 367 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 BTBD16Q32M84 506 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 LRIT3Q3SXY7 679 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 C22orf42Q6IC83 251 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 HTR3DQ70Z44 454 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TEX26Q8N6G2 289 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MROQ9BYG7 248 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DMRT3Q9NQL9 472 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 FAIMQ9NVQ4 179 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ANKRD36CQ5JPF3 1778 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 IGLON5A6NGN9 336 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 M0R233 179 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 NUAK1O60285 661 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ITGA5P08648 1049 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM156Q8N614 296 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 TOR1AIP2Q8NFQ8 470 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 AIFM2Q9BRQ8 373 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 OR8D2Q9GZM6 311 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 ABCD2Q9UBJ2 740 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 DHDHQ9UQ10 334 aa11.93□□□□□ -0.5
COL4A6-209ENST00000545689 MAGEA3P43357 314 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 DHPSP49366 369 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ID2Q02363 134 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 SLC39A5Q6ZMH5 540 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 SFXN5Q8TD22 340 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 IL17FQ96PD4 163 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PDE7BQ9NP56 450 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 UCKL1Q9NWZ5 548 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 HSPB11Q9Y547 144 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 MRPL3P09001 348 aaKnown RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 TMEM69Q5SWH9 247 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 VTCN1Q7Z7D3 282 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 PDZD3Q86UT5 571 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 KLHDC8AQ8IYD2 350 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ELP5Q8TE02 316 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 GPN2Q9H9Y4 310 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 RNF186Q9NXI6 227 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 GPR83Q9NYM4 423 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 LILRB3O75022 631 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CSN2P05814 226 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 FUT4P22083 530 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 FBLP22087 321 aaKnown RBP11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ITGB7P26010 798 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 STT3AP46977 705 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 CLEC14AQ86T13 490 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 OR4K5Q8NGD3 323 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
COL4A6-209ENST00000545689 INPP5KQ9BT40 448 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms