RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 PGS1Q32NB8 556 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 CRB2Q5IJ48 1285 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 ATP1A1-AS1Q5TC04 95 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 AGAP7PQ5VUJ5 663 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 RIMKLAQ8IXN7 391 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 CCDC116Q8IYX3 515 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 SLC2A12Q8TD20 617 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 COQ8BQ96D53 544 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 CNRIP1Q96F85 164 aaPredicted RBP12.91□□□□□ -0.34
TSEN54-203ENST00000545228 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
TSEN54-203ENST00000545228 THOC3Q96J01 351 aaKnown RBP12.91□□□□□ -0.34
TSEN54-203ENST00000545228 ZNF354BQ96LW1 612 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 ZNF681Q96N22 645 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 AGAP4Q96P64 663 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 DEFB126Q9BYW3 111 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 OR8D2Q9GZM6 311 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 EPN3Q9H201 632 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
TSEN54-203ENST00000545228 TAS2R9Q9NYW1 312 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 C5AR2Q9P296 337 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 PCDHGA9Q9Y5G4 932 aaKnown RBP12.91□□□□□ -0.34
TSEN54-203ENST00000545228 CLDN16Q9Y5I7 305 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 CPAMD8Q8IZJ3 1885 aa12.91□□□□□ -0.34
TSEN54-203ENST00000545228 FAM234BA2RU67 622 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 OR2W5A6NFC9 320 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 TGFBR3LH3BV60 316 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 PLOD2O00469 737 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 CFLARO15519 480 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 KRT16P08779 473 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 CASRP41180 1078 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 FRKP42685 505 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 FOXL2P58012 376 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 DCAF7P61962 342 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 SRSF1Q07955 248 aaKnown RBP eCLIP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 CHAF1BQ13112 559 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ZNF267Q14586 743 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 MEP1AQ16819 746 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ANKS4BQ8N8V4 417 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ELP5Q8TE02 316 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 TSPEARQ8WU66 669 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 PTPMT1Q8WUK0 201 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 NCLNQ969V3 563 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 AMDHD1Q96NU7 426 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 WDR77Q9BQA1 342 aaPredicted RBP12.9□□□□□ -0.34
TSEN54-203ENST00000545228 SLC25A23Q9BV35 468 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ANAPC2Q9UJX6 822 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ERVK-19Q9WJR5 959 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 ZNF451Q9Y4E5 1061 aa12.9□□□□□ -0.34
TSEN54-203ENST00000545228 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 TRBV11-1A0A0K0K1C0 115 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 PRSS51A0A1B0GVH4 220 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 PLOD3O60568 738 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 SHOX2O60902 331 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 PGRP06401 933 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 TMED10P49755 219 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 ANXA11P50995 505 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 CCL11P51671 97 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 EFNA3P52797 238 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 NRG3P56975 720 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 FUT7Q11130 342 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 HSPB3Q12988 150 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 FAM174BQ3ZCQ3 159 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 VPS26BQ4G0F5 336 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 TMEM198Q66K66 360 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 TMEM64Q6YI46 380 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 MMP21Q8N119 569 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 KRTCAP2Q8N6L1 136 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 HORMAD2Q8N7B1 307 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 C17orf47Q8NEP4 570 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 NFAM1Q8NET5 270 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 OR7A2PQ8NGA2 310 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 C9orf43Q8TAL5 461 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 NUBPLQ8TB37 319 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 SLC22A8Q8TCC7 542 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 C10orf82Q8WW14 230 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 SENP5Q96HI0 755 aaPredicted RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 OR52E6Q96RD3 313 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 ELAC2Q9BQ52 826 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 GLIPR2Q9H4G4 154 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 MAT2BQ9NZL9 334 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
TSEN54-203ENST00000545228 EXO1Q9UQ84 846 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 COPG1Q9Y678 874 aaKnown RBP12.89□□□□□ -0.35
TSEN54-203ENST00000545228 CCDC154A6NI56 674 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms