RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MAPK12P53778 367 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 FOXL2P58012 376 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 ARF3P61204 181 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 RAE1P78406 368 aaKnown RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 KLC1Q07866 573 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 AIMP2Q13155 320 aaKnown RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 DDX39BQ13838 428 aaKnown RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 CEBPEQ15744 281 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 DEFB110Q30KQ9 67 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 NKAIN1Q4KMZ8 207 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 AGKQ53H12 422 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 SGO1Q5FBB7 561 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 CCNYL2Q5T2Q4 361 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 C1orf189Q5VU69 101 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 FAM71E1Q6IPT2 247 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 C8orf82Q6P1X6 216 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 IGFL2Q6UWQ7 119 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 UBE3DQ7Z6J8 389 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 TRIM73Q86UV7 250 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 GPR180Q86V85 440 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 TMEM151BQ8IW70 566 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 C10orf67Q8IYJ2 551 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 PGAM4Q8N0Y7 254 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 TMEM132CQ8N3T6 1108 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 LIX1Q8N485 282 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 ZADH2Q8N4Q0 377 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 C2orf73Q8N5S3 287 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 CSNK1A1LQ8N752 337 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 ACOT4Q8N9L9 421 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 GOT1L1Q8NHS2 421 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 PSMA8Q8TAA3 256 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 UTP15Q8TED0 518 aaKnown RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 N4BP2L2Q92802 583 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 SPDL1Q96EA4 605 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 RAB3IPQ96QF0 476 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 WDR77Q9BQA1 342 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 BTBD10Q9BSF8 475 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 SPRTNQ9H040 489 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 SPNS1Q9H2V7 528 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 OR51B5Q9H339 312 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 COPS7BQ9H9Q2 264 aaPredicted RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 WDR41Q9HAD4 459 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 ATP13A2Q9NQ11 1180 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 AGPAT4Q9NRZ5 378 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 TAS2R1Q9NYW7 299 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 ARMCX1Q9P291 453 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 DHCR7Q9UBM7 475 aaKnown RBP6.17□□□□□ -1.42
CDCA3-209ENST00000544610 BTNL2Q9UIR0 455 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 DLGAP4Q9Y2H0 992 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 CSAG2Q9Y5P2 127 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 PTGDR2Q9Y5Y4 395 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 SPACA6W5XKT8 324 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 OTOGQ6ZRI0 2925 aa6.17□□□□□ -1.42
CDCA3-209ENST00000544610 GYG2O15488 501 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 LRRTM2O43300 516 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 HNRNPRO43390 633 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ERI3O43414 337 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 KLF4O43474 513 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 B3GALT2O43825 422 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 GALR3O60755 368 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 KLK1P06870 262 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ABCB1P08183 1280 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 FAM58BPP0C7Q3 252 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ITGAXP20702 1163 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MMP11P24347 488 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 HNRNPH1P31943 449 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 S100A3P33764 101 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 GALNSP34059 522 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CPOXP36551 454 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ZFP36L2P47974 494 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 PER3P56645 1201 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 YBX1P67809 324 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MEF2AQ02078 507 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 POU4F2Q12837 409 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ART3Q13508 389 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 PTGR1Q14914 329 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MAPKAPK3Q16644 382 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 TRMT5Q32P41 509 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 LRIF1Q5T3J3 769 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CPTPQ5TA50 214 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 B3GNTL1Q67FW5 361 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SCIMPQ6UWF3 145 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF771Q7L3S4 317 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SNX32Q86XE0 403 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 TRIML2Q8N7C3 387 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 TTC29Q8NA56 475 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 GOLM1Q8NBJ4 401 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 OR8J3Q8NGG0 315 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 GRHL3Q8TE85 626 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 C16orf78Q8WTQ4 265 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 TANKQ92844 425 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 FKBP10Q96AY3 582 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MOAP1Q96BY2 351 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 TM4SF18Q96CE8 201 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 KLHL29Q96CT2 875 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SLC7A6OSQ96CW6 309 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MTFMTQ96DP5 389 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms