RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CPED1A4D0V7 1026 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 H3BN98 237 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 HBP1O60381 514 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 STAG3L1P0CL83 205 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 PET100P0DJ07 73 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ATP5A1P25705 553 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SUSD4Q5VX71 490 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 KIAA0930Q6ICG6 404 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 MED25Q71SY5 747 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 CPXM2Q8N436 756 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ASB11Q8WXH4 323 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ERGIC1Q969X5 290 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 KLHL15Q96M94 604 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 DERL2Q9GZP9 239 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SAP130Q9H0E3 1048 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SMOXQ9NWM0 555 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 PARPBPQ9NWS1 579 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 POMPQ9Y244 141 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 TBL2Q9Y4P3 447 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 A6NNC1 897 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 FAM189A1O60320 539 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SAP30O75446 220 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 CTAG2O75638 210 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 KCNK2O95069 426 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 CTSAP10619 480 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 IL11P20809 199 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 AVPI1Q5T686 147 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 DYMQ7RTS9 669 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 FGD2Q7Z6J4 655 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 GPAT4Q86UL3 456 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF420Q8TAQ5 688 aaPredicted RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 BRIX1Q8TDN6 353 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 ABHD3Q8WU67 409 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 CELF6Q96J87 481 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 TDRD3Q9H7E2 651 aaKnown RBP8.47□□□□□ -1.05
VPS13D-212ENST00000543766 B4GALT6Q9UBX8 382 aa8.47□□□□□ -1.05
VPS13D-212ENST00000543766 SDR42E2A6NKP2 422 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 IFNA7P01567 189 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 ATXN1LP0C7T5 689 aaKnown RBP8.46□□□□□ -1.05
VPS13D-212ENST00000543766 DNASE1P24855 282 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 STARD6P59095 220 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 HNRNPA0Q13151 305 aaKnown RBP8.46□□□□□ -1.05
VPS13D-212ENST00000543766 ITPK1Q13572 414 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 ADGRE1Q14246 886 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 SLC35G1Q2M3R5 365 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 LRIF1Q5T3J3 769 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 FRMPD2BQ6IN97 320 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 MRNIPQ6NTE8 343 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 KCTD8Q6ZWB6 473 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 SYVN1Q86TM6 617 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 SYNE4Q8N205 404 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 FAM47BQ8NA70 645 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 OR9K2Q8NGE7 335 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 DNAJB14Q8TBM8 379 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 SLC38A4Q969I6 547 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 PLD4Q96BZ4 506 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 GSX1Q9H4S2 264 aaPredicted RBP8.46□□□□□ -1.05
VPS13D-212ENST00000543766 CNTD2Q9H8S5 307 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 OLAHQ9NV23 265 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 FAM118AQ9NWS6 357 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 ZNF639Q9UID6 485 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 SSUH2Q9Y2M2 353 aa8.46□□□□□ -1.05
VPS13D-212ENST00000543766 FAM237BA0A1B0GVD1 139 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NPIPA5E9PKD4 350 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NPIPA3F8WFD2 350 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 EEF2KO00418 725 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NARSO43776 548 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 EDIL3O43854 480 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ENTPD3O75355 529 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CNTN5O94779 1100 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 THBS1P07996 1170 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 SERPINA6P08185 405 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CTXN2P0C2S0 81 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF14P17017 642 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NDST1P52848 882 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 HMGCS1Q01581 520 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 RSU1Q15404 277 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NTRK2Q16620 822 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 TEX44Q53QW1 395 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 KLHL17Q6TDP4 642 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 GDPD4Q6W3E5 623 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF517Q6ZMY9 492 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 BBS12Q6ZW61 710 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NXNL1Q96CM4 212 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 PDLIM5Q96HC4 596 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 FAM71F1Q96KD3 344 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 HSD17B14Q9BPX1 270 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 TMEM121Q9BTD3 319 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ZFYVE1Q9HBF4 777 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 SLC2A9Q9NRM0 540 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 MIOSQ9NXC5 875 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 PTGFRNQ9P2B2 879 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CDH22Q9UJ99 828 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NPIPA1Q9UND3 350 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CDK5RAP2Q96SN8 1893 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 EXOC1LA0A1B0GW35 172 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 E7ENX8 843 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 M0QZK8 103 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms