RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 C6orf47O95873 294 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 LSP1P33241 339 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 MC3RP41968 323 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ST13P50502 369 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 SSR4P51571 173 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 GPR143P51810 404 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 POLR2JP52435 117 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 DGKQP52824 942 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SEC24CP53992 1094 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 NRG3P56975 720 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SOX8P57073 446 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 KCNK10P57789 538 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 RNF4P78317 190 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PRR5P85299 388 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 MAP4K2Q12851 820 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZNF155Q12901 538 aaPredicted RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 MFAP5Q13361 173 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PDE7AQ13946 482 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SQLEQ14534 574 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZNHIT3Q15649 155 aaPredicted RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 PRSS53Q2L4Q9 553 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 DPY19L1Q2PZI1 675 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PRICKLE4Q2TBC4 344 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 FAM174BQ3ZCQ3 159 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 AGKQ53H12 422 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TRMT12Q53H54 448 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZNF628Q5EBL2 1059 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SPANXN4Q5MJ08 99 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ACER2Q5QJU3 275 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TCTN3Q6NUS6 607 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ANGPTL8Q6UXH0 198 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SPATA21Q7Z572 469 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TAGAPQ8N103 731 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 BEST3Q8N1M1 668 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 HORMAD2Q8N7B1 307 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TEX19Q8NA77 164 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 GLB1L3Q8NCI6 653 aaPredicted RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 APCDD1LQ8NCL9 501 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SLC22A8Q8TCC7 542 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 NUDT8Q8WV74 236 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ASB15Q8WXK1 588 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 OR5P2Q8WZ92 322 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 AMDHD1Q96NU7 426 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 OR52E6Q96RD3 313 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ELAC2Q9BQ52 826 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 UTP23Q9BRU9 249 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 MFRPQ9BY79 579 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 SLC25A18Q9H1K4 315 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 RMND5AQ9H871 391 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ANKRA2Q9H9E1 313 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 EQTNQ9NQ60 294 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ACSS1Q9NUB1 689 aaPredicted RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZCCHC3Q9NUD5 404 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 ANKRD10Q9NXR5 420 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TAS2R9Q9NYW1 312 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PLA2G3Q9NZ20 509 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 MAT2BQ9NZL9 334 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 ZIM2Q9NZV7 527 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 CCDC167Q9P0B6 97 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 KLHL14Q9P2G3 628 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 MAP10Q9P2G4 905 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TUBD1Q9UJT1 453 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 EXO1Q9UQ84 846 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 ERVK-11Q9UQG0 969 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PCDHGB7Q9Y5F8 929 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 PCDHGA9Q9Y5G4 932 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 CLDN16Q9Y5I7 305 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 GPR45Q9Y5Y3 372 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 TNRC6AQ8NDV7 1962 aaKnown RBP5.87□□□□□ -1.47
LTBR-212ENST00000543542 CHD8Q9HCK8 2581 aa5.87□□□□□ -1.47
LTBR-212ENST00000543542 CELSR3Q9NYQ7 3312 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 NBEAQ8NFP9 2946 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 IGF2RP11717 2491 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 APC2O95996 2303 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 ACACAQ13085 2346 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 AHCTF1Q8WYP5 2266 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 FAM234BA2RU67 622 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CCDC154A6NI56 674 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 A8MVJ9 347 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 NR5A2O00482 541 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 EMC8O43402 210 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 PRKNO60260 465 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 ITGA10O75578 1167 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CEACAM4O75871 244 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 OR2J2O76002 312 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 WDPCPO95876 746 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 IL6P05231 212 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 PGRP06401 933 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 KRT20P35900 424 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CHI3L1P36222 383 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 CYB561P49447 251 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 CDK9P50750 372 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 NR0B1P51843 470 aaKnown RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 SLC37A1P57057 533 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 IRX1P78414 480 aaPredicted RBP5.86□□□□□ -1.47
LTBR-212ENST00000543542 LRRC74AQ0VAA2 488 aa5.86□□□□□ -1.47
LTBR-212ENST00000543542 FUT7Q11130 342 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms