RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 XKR7Q5GH72 579 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 FHL5Q5TD97 284 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 FAM71E1Q6IPT2 247 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 NOXRED1Q6NXP6 359 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 Q6ZSR9 355 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 CLYBLQ8N0X4 340 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 ZFP62Q8NB50 900 aaPredicted RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 PSD4Q8NDX1 1056 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 TWIST2Q8WVJ9 160 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 TP53INP1Q96A56 240 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 SPACA9Q96E40 222 aaPredicted RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 CCT7Q99832 543 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 LRTM1Q9HBL6 345 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 SH2D2AQ9NP31 389 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 SLC35C2Q9NQQ7 365 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 ERVK-11Q9UQG0 969 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 POLR3HQ9Y535 204 aaPredicted RBP12.12□□□□□ -0.47
LTBR-208ENST00000541005 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
LTBR-208ENST00000541005 TMEM114B3SHH9 223 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 KLRC4-KLRK1H3BQV0 150 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 LSM1O15116 133 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 ZIC2O95409 532 aaPredicted RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 SERPINE1P05121 402 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 FBXO45P0C2W1 286 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 MPP2Q14168 576 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 EIF2S3LQ2VIR3 472 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 ZNF628Q5EBL2 1059 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 NUDCD3Q8IVD9 361 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 DOK4Q8TEW6 326 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 ADIPOR1Q96A54 375 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 EXOSC8Q96B26 276 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 GPR137Q96N19 417 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 OR10A5Q9H207 317 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 EXO1Q9UQ84 846 aaKnown RBP12.11□□□□□ -0.47
LTBR-208ENST00000541005 ENTPD4Q9Y227 616 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 FIS1Q9Y3D6 152 aa12.11□□□□□ -0.47
LTBR-208ENST00000541005 C2orf92A0A1B0GVN3 265 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 PEX1O43933 1283 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 SEC22BO75396 215 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 SLITRK5O94991 958 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 CBX7O95931 251 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 STSP08842 583 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 IFI6P09912 130 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 LINC00032P0C843 101 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 ZNF24P17028 368 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 GPX3P22352 226 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 GRK2P25098 689 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 MEOX1P50221 254 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 SLC18A1P54219 525 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 ALDH6A1Q02252 535 aaKnown RBP12.1□□□□□ -0.47
LTBR-208ENST00000541005 DUSP8Q13202 625 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 LTB4RQ15722 352 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 NTRK2Q16620 822 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.1□□□□□ -0.47
LTBR-208ENST00000541005 KRTCAP3Q53RY4 240 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 RNFT1Q5M7Z0 435 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 FAM111BQ6SJ93 734 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 IL20RBQ6UXL0 311 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 BNC2Q6ZN30 1099 aaPredicted RBP12.1□□□□□ -0.47
LTBR-208ENST00000541005 TAGAPQ8N103 731 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 C16orf52Q8NHV5 167 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 TLCD1Q96CP7 247 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 MIEF1Q9NQG6 463 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 DEPPQ9NTK1 212 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 HAO1Q9UJM8 370 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 CFL2Q9Y281 166 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
LTBR-208ENST00000541005 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
LTBR-208ENST00000541005 A0A0G2JMM0 328 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 A0A1W2PPB8 328 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 A0A1W2PRS3 328 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 KIR3DP1A8MWS1 328 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 MYO1GB0I1T2 1018 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 PLOD3O60568 738 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 TBX19O60806 448 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 SEMA7AO75326 666 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 BCAS2O75934 225 aaPredicted RBP12.09□□□□□ -0.47
LTBR-208ENST00000541005 PCSK2P16519 638 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 SDC1P18827 310 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 TACR1P25103 407 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 KCNK10P57789 538 aa12.09□□□□□ -0.47
LTBR-208ENST00000541005 C2orf80Q0P641 193 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms