RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 SOX1O00570 391 aaPredicted RBP9.04□□□□□ -0.96
TTC39C-203ENST00000540918 ZNF195O14628 629 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 MFN2O95140 757 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 OLFM2O95897 454 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 FESP07332 822 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 HSD17B1P14061 328 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 UGT2B7P16662 529 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 ZNF182P17025 639 aaPredicted RBP9.04□□□□□ -0.96
TTC39C-203ENST00000540918 OTX2P32243 289 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 PCYT1AP49585 367 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 VBP1P61758 197 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 ST3GAL3Q11203 375 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 GPR19Q15760 415 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 TIGD6Q17RP2 521 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 C5orf22Q49AR2 442 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 RUNDC3AQ59EK9 446 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 PIP5KL1Q5T9C9 394 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 PRPF38BQ5VTL8 546 aaKnown RBP9.04□□□□□ -0.96
TTC39C-203ENST00000540918 AGBL4Q5VU57 503 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 LCTLQ6UWM7 567 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 TMEM92Q6UXU6 159 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 TECPR1Q7Z6L1 1165 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 HORMAD2Q8N7B1 307 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 OR2I1PQ8NGU4 316 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 TSPEARQ8WU66 669 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 EZH1Q92800 747 aaPredicted RBP9.04□□□□□ -0.96
TTC39C-203ENST00000540918 CDS1Q92903 461 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 FAM46AQ96IP4 442 aaKnown RBP9.04□□□□□ -0.96
TTC39C-203ENST00000540918 ZNF583Q96ND8 569 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 TMED9Q9BVK6 235 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 IKZF5Q9H5V7 419 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 OR6C2Q9NZP2 312 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 MARK1Q9P0L2 795 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 COMMD3Q9UBI1 195 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 ZNF225Q9UK10 706 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 SH2B3Q9UQQ2 575 aa9.04□□□□□ -0.96
TTC39C-203ENST00000540918 DAPL1A0PJW8 107 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 AIFM1O95831 613 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 DDCP20711 480 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 COL9A1P20849 921 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 DCTP40126 519 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 NRG3P56975 720 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 SLC3A1Q07837 685 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 ATP6AP1Q15904 470 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PRAMEF17Q5VTA0 474 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 KIAA0895LQ68EN5 471 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 FAM220AQ7Z4H9 259 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 IGFN1Q86VF2 1251 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 OR10H5Q8NGA6 315 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 OR8K3Q8NH51 312 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 NKD1Q969G9 470 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 OR4K3Q96R72 315 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 ADOQ96SZ5 270 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 CLMPQ9H6B4 373 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PLGRKTQ9HBL7 147 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TM9SF3Q9HD45 589 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 MKKSQ9NPJ1 570 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PPT2Q9UMR5 302 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PCDHGA2Q9Y5H1 932 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 GREB1LQ9C091 1923 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 C2orf92A0A1B0GVN3 265 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 EIF3FO00303 357 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 AQP9O43315 295 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PSIP1O75475 530 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 STSP08842 583 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 BCL6P41182 706 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TNFRSF4P43489 277 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 OR1D5P58170 312 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 CRYZQ08257 329 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 SMN1Q16637 294 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 KIAA1614Q5VZ46 1190 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 METRNLQ641Q3 311 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 VRK2Q86Y07 508 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 ISL2Q96A47 359 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TAPBPLQ9BX59 468 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 HDAC8Q9BY41 377 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PREBQ9HCU5 417 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 SCML1Q9UN30 329 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 BTBD3Q9Y2F9 522 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TDRD6O60522 2096 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 IGHV3-20A0A0C4DH32 117 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 A6NL46 340 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 PLPP1O14494 284 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 AREL1O15033 823 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 NPC1O15118 1278 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 IL9P15248 144 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 FBLP22087 321 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 CSNK1G2P78368 415 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 SRSF5Q13243 272 aaKnown RBP9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TIMM50Q3ZCQ8 353 aa9.03□□□□□ -0.96
TTC39C-203ENST00000540918 TMEM164Q5U3C3 297 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms