RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MRPS31Q92665 395 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RFT1Q96AA3 541 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ESAMQ96AP7 390 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PYCR2Q96C36 320 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 FAHD2AQ96GK7 314 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 DHTKD1Q96HY7 919 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SAMD8Q96LT4 415 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF560Q96MR9 790 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ATF6BQ99941 703 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 FUCA2Q9BTY2 467 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 MFFQ9GZY8 342 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ATP13A3Q9H7F0 1226 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF665Q9H7R5 613 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RAVER2Q9HCJ3 691 aaKnown RBP0.9□□□□□ -2.27
HIF1A-204ENST00000539097 ECHDC1Q9NTX5 307 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 PANK4Q9NVE7 773 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 KLRF1Q9NZS2 232 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 RAI14Q9P0K7 980 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 SLC12A6Q9UHW9 1150 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 FBXW2Q9UKT8 454 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 C2CD2Q9Y426 696 aa0.9□□□□□ -2.27
HIF1A-204ENST00000539097 A0A087WZY1 265 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 KRT87PA6NCN2 255 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PDHXO00330 501 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PDXKO00764 312 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ATP9AO75110 1047 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ANGPTL1O95841 491 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TGFAP01135 160 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 FGF1P05230 155 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SP9P0CG40 484 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 DBTP11182 482 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GFAPP14136 432 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 FCGR2CP31995 323 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OPRD1P41143 372 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MNDAP41218 407 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 HMGA2P52926 109 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CLDN18P56856 261 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 RPS6P62753 249 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GFPT1Q06210 699 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 KLHL30Q0D2K2 578 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF74Q16587 644 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 EXOC3L2Q2M3D2 409 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 BEND3Q5T5X7 828 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 LIPKQ5VXJ0 399 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR6B2Q6IFH4 312 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 UGT3A1Q6NUS8 523 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 REG3GQ6UW15 175 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NCCRP1Q6ZVX7 275 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PPP1R27Q86WC6 154 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CFAP206Q8IYR0 622 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF491Q8N8L2 437 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MINDY2Q8NBR6 621 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 C17orf47Q8NEP4 570 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR4K1Q8NGD4 311 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 OR1L3Q8NH93 324 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF473Q8WTR7 871 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TAF15Q92804 592 aaKnown RBP eCLIP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ITFG2Q969R8 447 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NXPE2Q96DL1 559 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NECTIN4Q96NY8 510 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 FAM111AQ96PZ2 611 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 LGMNQ99538 433 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 BARHL1Q9BZE3 327 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 Q9HAA7 133 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SLC52A3Q9NQ40 469 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TBC1D13Q9NVG8 400 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GTSE1Q9NYZ3 720 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SPACA6W5XKT8 324 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ATRXP46100 2492 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TNRC18O15417 2968 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MAP3K4Q9Y6R4 1608 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 VWDEQ8N2E2 1590 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NUP153P49790 1475 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 MAP3K5Q99683 1374 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TRAV6A0A075B6T7 132 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A0A0J9YYE9 177 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 A8MU76 341 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 DLGAP1O14490 977 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 P2RX6O15547 441 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 NUDT21O43809 227 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CSO75390 466 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CBR3O75828 277 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SERF1AO75920 110 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 PRAMEF12O95522 483 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 IGLV1-44P01699 117 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 TRBC1P01850 177 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 HEXBP07686 556 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 STAG3L1P0CL83 205 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 T-ENOLP0DO92 83 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 GHRP10912 638 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 YAP1P46937 504 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CSNK2BP67870 215 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZFP36L1Q07352 338 aaKnown RBP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ARL16Q0P5N6 197 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 CBX3Q13185 183 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 DPYSL2Q16555 572 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 SRSF7Q16629 238 aaKnown RBP eCLIP0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF528Q3MIS6 628 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF585BQ52M93 769 aa0.89□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF311Q5JNZ3 666 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms