RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 C1orf105O95561 183 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CD79AP11912 226 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ETFAP13804 333 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 CSNK1DP48730 415 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ALDH3A2P51648 485 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 AP3S2P59780 193 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ARPC4P59998 168 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 WDR53Q7Z5U6 358 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 ARFGAP1Q8N6T3 406 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 AGBL5Q8NDL9 886 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR13H1Q8NG92 308 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR52R1Q8NGF1 315 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 OR9A4Q8NGU2 314 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 SGTBQ96EQ0 304 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 MAPKAP1Q9BPZ7 522 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 ACTRT3Q9BYD9 372 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TRIM36Q9NQ86 728 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 PARPBPQ9NWS1 579 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 TAS2R1Q9NYW7 299 aa5.1□□□□□ -1.59
LRP6-203ENST00000538239 THAP10Q9P2Z0 257 aaPredicted RBP5.1□□□□□ -1.59
LRP6-203ENST00000538239 MYH15Q9Y2K3 1946 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 LOC100509620A0A075B734 347 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 POU3F2P20265 443 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 ECHS1P30084 290 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 CCR7P32248 378 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 GGT2P36268 569 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 TPMTP51580 245 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SH3BP2P78314 561 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 CBFBQ13951 182 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 TSTQ16762 297 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 CES4AQ5XG92 561 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 CCDC80Q76M96 950 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 DNAAF1Q8NEP3 725 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 PGAM5Q96HS1 289 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 PAK6Q9NQU5 681 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 LIPT1Q9Y234 373 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 FAM240BA0A1B0GVZ2 78 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SMIM30A4D0T7 59 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ZNF879B4DU55 563 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SDHDO14521 159 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 HSPA12AO43301 675 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SIGLEC6O43699 453 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ATE1O95260 518 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 RAB36O95755 333 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 UGT2B7P16662 529 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 MALLQ13021 153 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 EXOSC7Q15024 291 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 OCLNQ16625 522 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 UGT3A2Q3SY77 523 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SCGB2B2Q4G0G5 96 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 CTSL3PQ5NE16 218 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ATG9BQ674R7 924 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ZNF227Q86WZ6 799 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 TREML1Q86YW5 311 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 UEVLDQ8IX04 471 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 C19orf47Q8N9M1 422 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 OR51G2Q8NGK0 314 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ABHD5Q8WTS1 349 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SPRYD4Q8WW59 207 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 STON2Q8WXE9 905 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 THAP4Q8WY91 577 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 MAL2Q969L2 176 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ECHDC3Q96DC8 303 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 DOHHQ9BU89 302 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ARRDC1-AS1Q9H2J1 176 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ACTR3BQ9P1U1 418 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ING4Q9UNL4 249 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 MGAT4BQ9UQ53 548 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 GRIP1Q9Y3R0 1128 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 FAM172BPA6NC97 362 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 SMAD9O15198 467 aaKnown RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 CACNG3O60359 315 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 APOL3O95236 402 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 NPPAP01160 153 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ERCC1P07992 297 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 PRLHRP49683 370 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 RORCP51449 518 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 YPEL5P62699 121 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 FAM189BP81408 668 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 RBPJQ06330 500 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ZNF77Q15935 545 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 NKAPLQ5M9Q1 402 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 HMBOX1Q6NT76 420 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 LETMD1Q6P1Q0 360 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 IL20RBQ6UXL0 311 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 ISCA2Q86U28 154 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 OR5T2Q8NGG2 359 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 WDR20Q8TBZ3 569 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 BCL7CQ8WUZ0 217 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 SEC14L1Q92503 715 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 PITX2Q99697 317 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 PKP2Q99959 881 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 C6orf106Q9H6K1 298 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 CUEDC1Q9NWM3 386 aaPredicted RBP5.09□□□□□ -1.59
LRP6-203ENST00000538239 SH3D21A4FU49 640 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 GFRA2O00451 464 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 YY2O15391 372 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 HTR6P50406 440 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 INHBCP55103 352 aa5.09□□□□□ -1.59
LRP6-203ENST00000538239 PITPNAQ00169 270 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms