RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PGRMC2O15173 223 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 PPM1DO15297 605 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 UGT2B17O75795 530 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 ATE1O95260 518 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 EML2O95834 649 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 OSMP13725 252 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 CPN2P22792 545 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 IFNGR2P38484 337 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 UGT2B15P54855 530 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 RAB8AP61006 207 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 UBE2IP63279 158 aaKnown RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 ILKQ13418 452 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 RPS26P11Q5JNZ5 115 aaPredicted RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 ZNF770Q6IQ21 691 aaPredicted RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 NIPAL1Q6NVV3 410 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 FBXO42Q6P3S6 717 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 CD300LDQ6UXZ3 194 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 OOSP2Q86WS3 158 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 AQP11Q8NBQ7 271 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 GPR32P1Q8NGA4 272 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 OR4K14Q8NGD5 310 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 YIPF2Q9BWQ6 316 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 SERHL2Q9H4I8 314 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 ANKRD19PQ9H560 264 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 PLGRKTQ9HBL7 147 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 GPR27Q9NS67 375 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 PAK1IP1Q9NWT1 392 aaPredicted RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 CNOT2Q9NZN8 540 aaKnown RBP12.79□□□□□ -0.36
SMG6-203ENST00000536871 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
SMG6-203ENST00000536871 A0A0J9YY10 115 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 PCDH17O14917 1159 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 GABARAPO95166 117 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 LGI1O95970 557 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ZNF888P0CJ79 500 aaPredicted RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 MAGP20916 626 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ACVR2AP27037 513 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 CRISP1P54107 249 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 SKP1P63208 163 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 GPR18Q14330 331 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 LASP1Q14847 261 aaKnown RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 TBCEQ15813 527 aaPredicted RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 SYPL1Q16563 259 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 TPRG1LQ5T0D9 272 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 UBE2UQ5VVX9 321 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 FAM180BQ6P0A1 224 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 CCDC71Q8IV32 467 aaPredicted RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 FAM20CQ8IXL6 584 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 NUP43Q8NFH3 380 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 PMM1Q92871 262 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 NIPSNAP1Q9BPW8 284 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 FUNDC2Q9BWH2 189 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 EVA1AQ9H8M9 152 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 RASSF1Q9NS23 344 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 FKBP14Q9NWM8 211 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 GIN1Q9NXP7 522 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 KLHL28Q9NXS3 571 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 DSPPQ9NZW4 1301 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 OR6C74A6NCV1 312 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ZAR1LA6NP61 321 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 C4orf51C9J302 202 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 J3KTA2 159 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 RECKO95980 971 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 IGHV4-34P06331 123 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 SRFP11831 508 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 CTSEP14091 401 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ALOX12P18054 663 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 GSTM3P21266 225 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ELAVL4P26378 380 aaKnown RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 EPHA2P29317 976 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 LIM2P55344 173 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 OLR1P78380 273 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 GANABQ14697 944 aaKnown RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 C18orf63Q68DL7 685 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 KLHL35Q6PF15 583 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 RNF44Q7L0R7 432 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 DNAJC22Q8N4W6 341 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 OR13H1Q8NG92 308 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 CCL4L1Q8NHW4 92 aa12.78□□□□□ -0.36
SMG6-203ENST00000536871 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
SMG6-203ENST00000536871 APH1BQ8WW43 257 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms