RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PTGR2Q8N8N7 351 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR4K14Q8NGD5 310 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR52B6Q8NGF0 335 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SPPL2AQ8TCT8 520 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 RILPQ96NA2 401 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 FRG2BQ96QU4 278 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SECISBP2Q96T21 854 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ANGPTL4Q9BY76 406 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR10A5Q9H207 317 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 AHSPQ9NZD4 102 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 IKBKGQ9Y6K9 419 aa18.04■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SYT5O00445 386 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 DVL2O14641 736 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CTAG2O75638 210 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TRAPPC6AO75865 159 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 EPPINO95925 133 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 KLK1P06870 262 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 RBP1P09455 135 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CT62P0C5K7 136 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 UQCRC1P31930 480 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 MASP1P48740 699 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 XKP51811 444 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 RPP38P78345 283 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CRYZQ08257 329 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SNTB1Q13884 538 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C10orf62Q5T681 223 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 BICRALQ6AI39 1079 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PAGE2Q7Z2X7 111 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PLD6Q8N2A8 252 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZNF615Q8N8J6 731 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ADIPOR1Q96A54 375 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PHF21BQ96EK2 531 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 LRRC46Q96FV0 321 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C16orf45Q96MC5 204 aaPredicted RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TIMP4Q99727 224 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NTMT1Q9BV86 223 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 POLDIP3Q9BY77 421 aaKnown RBP18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZDHHC18Q9NUE0 388 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ADAM29Q9UKF5 820 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TMCO1Q9UM00 188 aa18.03■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ACSL3O95573 720 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 HPNP05981 417 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CPMP14384 443 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 NT5EP21589 574 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 BMP5P22003 454 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 IST1P53990 364 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 IFT88Q13099 833 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 SF3B4Q15427 424 aaKnown RBP eCLIP18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ACSF3Q4G176 576 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 CCNYL2Q5T2Q4 361 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 LACC1Q8IV20 430 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PM20D2Q8IYS1 436 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C17orf47Q8NEP4 570 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 TNIP2Q8NFZ5 429 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 OR7G1Q8NGA0 311 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 MRPL1Q9BYD6 325 aaKnown RBP18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 UBQLN3Q9H347 655 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ACSS3Q9H6R3 686 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 ZNF358Q9NW07 568 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 PCTPQ9UKL6 214 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 C15orf41Q9Y2V0 281 aa18.02■□□□□ 0.48
TNFRSF1B-204ENST00000536782 STX16-NPEPL1H3BU86 382 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 STX16O14662 325 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GUCY1B2O75343 617 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PORP16435 677 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 KRT15P19012 456 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CEACAM8P31997 349 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TIMP3P35625 211 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CASP3P42574 277 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ASCL1P50553 236 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 CDK9P50750 372 aaKnown RBP18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FNDC7Q5VTL7 733 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 RELL2Q8NC24 303 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NAXEQ8NCW5 288 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NINJ1Q92982 152 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GNRHR2Q96P88 292 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PRDM14Q9GZV8 571 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ZBTB26Q9HCK0 441 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NINJ2Q9NZG7 142 aa18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 ZNF629Q9UEG4 869 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1B-204ENST00000536782 FLNAP21333 2647 aaKnown RBP18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SMIM24O75264 130 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 IL2RAP01589 272 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GPX3P22352 226 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MAPK12P53778 367 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 WNT3P56703 355 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TRAF3Q13114 568 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TOMM20Q15388 145 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 GGTA1PQ4G0N0 100 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 VASNQ6EMK4 673 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 MILR1Q7Z6M3 343 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 PRR22Q8IZ63 422 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 METTL4Q8N3J2 472 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TRPC4APQ8TEL6 797 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 HSPBAP1Q96EW2 488 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 TMEM41AQ96HV5 264 aa18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 NSUN5Q96P11 429 aaKnown RBP18■□□□□ 0.47
TNFRSF1B-204ENST00000536782 SH3GL2Q99962 352 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms