RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CARD16Q5EG05 197 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM270Q6UE05 265 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 GLDNQ6ZMI3 551 aaPredicted RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 TAF8Q7Z7C8 310 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 ZSCAN30Q86W11 494 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 C17orf82Q86X59 251 aaPredicted RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 LINC00301Q8NCQ3 95 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 OR4D9Q8NGE8 314 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 OR8K5Q8NH50 307 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 PATE1Q8WXA2 126 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 SGCDQ92629 289 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 KIAA1143Q96AT1 154 aaPredicted RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 POPDC2Q9HBU9 364 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 DDIT4Q9NX09 232 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 RCOR3Q9P2K3 495 aaPredicted RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 POLG2Q9UHN1 485 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 TRAF3IP3Q9Y228 551 aa4.93□□□□□ -1.62
CLIP1-207ENST00000536634 MDC1Q14676 2089 aaKnown RBP4.93□□□□□ -1.62
CLIP1-207ENST00000536634 CALUO43852 315 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 DIAPH2O60879 1101 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 GRAP2O75791 330 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 TM7SF2O76062 418 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 STK17BO94768 372 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 TNFP01375 233 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 PAEPP09466 180 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 KRT13P13646 458 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 GM2AP17900 193 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CCR1P32246 355 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CSTF2P33240 577 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 MAN1A1P33908 653 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 HOXA1P49639 335 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 ENPEPQ07075 957 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 TRA2AQ13595 282 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 STK38Q15208 465 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 DCAF12Q5T6F0 453 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 LEKR1Q6ZMV7 388 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CLEC17AQ6ZS10 378 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 TSPAN33Q86UF1 283 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 DEFB106AQ8N104 65 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CCDC112Q8NEF3 446 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CXorf40AQ8TE69 158 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 RAB7BQ96AH8 199 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 PHF21AQ96BD5 680 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 MOCOSQ96EN8 888 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 C19orf60Q96EN9 201 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 ELMOD3Q96FG2 381 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 APOOQ9BUR5 198 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 MUC13Q9H3R2 512 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 DPEP2Q9H4A9 486 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 MAGEF1Q9HAY2 307 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 EXOC1Q9NV70 894 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 UBA2Q9UBT2 640 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 SLC12A6Q9UHW9 1150 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 KIAA1257Q9ULG3 409 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 CORO1CQ9ULV4 474 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 GAB2Q9UQC2 676 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 B3GALT5Q9Y2C3 310 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 COQ4Q9Y3A0 265 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 TMEM184BQ9Y519 407 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-207ENST00000536634 NBEAL1Q6ZS30 2694 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 STAB1Q9NY15 2570 aa4.92□□□□□ -1.62
CLIP1-207ENST00000536634 NSD1Q96L73 2696 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ZGRF1Q86YA3 2104 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 CNTRLQ7Z7A1 2325 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 IGHV1OR21-1A0A087WYE8 117 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 PRSS47A8MTI9 375 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 MAP2K7O14733 419 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 SYNGR3O43761 229 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 DAB1O75553 588 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 AMBPP02760 352 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 FGF1P05230 155 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 SYT1P21579 422 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 AK4P27144 223 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ACADLP28330 430 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 OR1E1P30953 314 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 AHRP35869 848 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 DLSTP36957 453 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 MC1RQ01726 317 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 CHAF1BQ13112 559 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 NME3Q13232 169 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ZCWPW2Q504Y3 356 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 GKAP1Q5VSY0 366 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 SETD3Q86TU7 594 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 CCDC190Q86UF4 302 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 MCEMP1Q8IX19 187 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 PM20D2Q8IYS1 436 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 RYBPQ8N488 228 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 SLC38A9Q8NBW4 561 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 OR56A4Q8NGH8 313 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 PAGE5Q96GU1 130 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 RANBP9Q96S59 729 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ITPAQ9BY32 194 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 SUDS3Q9H7L9 328 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ACP6Q9NPH0 428 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 PIGVQ9NUD9 493 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 ARHGEF38Q9NXL2 777 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 MTMR6Q9Y217 621 aa4.91□□□□□ -1.62
CLIP1-207ENST00000536634 RPS6KL1Q9Y6S9 549 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms