RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF556Q9HAH1 456 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 NMNAT1Q9HAN9 279 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 KCNK12Q9HB15 430 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ANKHQ9HCJ1 492 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 CHCHD3Q9NX63 227 aaKnown RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF226Q9NYT6 803 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TRPC4Q9UBN4 977 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 CES1P1Q9UKY3 287 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 SNX7Q9UNH6 387 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ARHGEF17Q96PE2 2063 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 M0R082 166 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 M0R129 80 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 KDM1AO60341 852 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 PDE9AO76083 593 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ASGR2P07307 311 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 CDH3P22223 829 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 FEN1P39748 380 aaKnown RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TPMTP51580 245 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TUBA1BP68363 451 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 SYT16Q17RD7 645 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 COLEC12Q5KU26 742 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 KLHL17Q6TDP4 642 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TUBA1AQ71U36 451 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 COMTD1Q86VU5 262 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 NLGN4XQ8N0W4 816 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 TBC1D19Q8N5T2 526 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 RPLP0P6Q8NHW5 317 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 VANGL1Q8TAA9 524 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF354BQ96LW1 612 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 ZNF607Q96SK3 696 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 SELENONQ9NZV5 590 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 P2RX2Q9UBL9 471 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 SEC14L3Q9UDX4 400 aa12.62□□□□□ -0.39
VPS33B-202ENST00000535906 NR2F1P10589 423 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 DRD1P21728 446 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 UGT2B10P36537 528 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 TGFBR1P36897 503 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 DGKEP52429 567 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 PTGES3Q15185 160 aaKnown RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 TIGD6Q17RP2 521 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 VN1R4Q7Z5H5 301 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 PAQR7Q86WK9 346 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 TAGAPQ8N103 731 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 MSLNLQ96KJ4 702 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 DCSTAMPQ9H295 470 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 SRMSQ9H3Y6 488 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 PCOLCE2Q9UKZ9 415 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 GPC6Q9Y625 555 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM247A6NEH6 219 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 PROM1O43490 865 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 AIREO43918 545 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 RASGRP1O95267 797 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 HNRNPA2B1P22626 353 aaKnown RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 NUDT6P53370 316 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 IFITM3Q01628 133 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 LASP1Q14847 261 aaKnown RBP12.61□□□□□ -0.39
VPS33B-202ENST00000535906 SEC23BQ15437 767 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 SLC48A1Q6P1K1 146 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 DEF8Q6ZN54 512 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 HMGN2P46Q86SG4 172 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 TRIM69Q86WT6 500 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 MAPKAP1Q9BPZ7 522 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 ANKRA2Q9H9E1 313 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 ZSCAN32Q9NX65 697 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 ENOPH1Q9UHY7 261 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
VPS33B-202ENST00000535906 A6NCN8 305 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ARRDC5A6NEK1 342 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 GUCY1B2O75343 617 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 SERPINB7O75635 380 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 APBB3O95704 486 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 COL4A2P08572 1712 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 F3P13726 295 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 NDUFS1P28331 727 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 CTSKP43235 329 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ARFIP1P53367 373 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 BTN3A2P78410 334 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 FUT5Q11128 374 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 COL9A2Q14055 689 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 LEXMQ3ZCV2 418 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 PERM1Q5SV97 790 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TMEM107Q6UX40 140 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 TRIM73Q86UV7 250 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 SRFBP1Q8NEF9 429 aaKnown RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 FLVCR1-AS1Q8TAF5 88 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 NEURL2Q9BR09 285 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 DSN1Q9H410 356 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ARMC7Q9H6L4 198 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ZBTB20Q9HC78 741 aaPredicted RBP12.6□□□□□ -0.39
VPS33B-202ENST00000535906 GIN1Q9NXP7 522 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 GPR83Q9NYM4 423 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 ZW10O43264 779 aa12.6□□□□□ -0.39
VPS33B-202ENST00000535906 CHRM4P08173 479 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms