RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ZNF615Q8N8J6 731 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 GOT1L1Q8NHS2 421 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC22A8Q8TCC7 542 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 TRPC4APQ8TEL6 797 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 DOK4Q8TEW6 326 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF483Q8TF39 744 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 SREK1Q8WXA9 508 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 RND1Q92730 232 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 RIT1Q92963 219 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FRG2BQ96QU4 278 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 MRPL57Q9BQC6 102 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ERVK-6Q9BXR3 956 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 WWTR1Q9GZV5 400 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 CXorf21Q9HAI6 301 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 TEX10Q9NXF1 929 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 CES1P1Q9UKY3 287 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 CNOT11Q9UKZ1 510 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ERVK-19Q9WJR5 959 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 IQANK1A0A1B0GTG1 560 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 TRIM49D1C9J1S8 452 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 NPIPA2E9PIF3 369 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 NPIPA3F8WFD2 350 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 PPP6CO00743 305 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 HCN1O60741 890 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 GBAP04062 536 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 CELA3AP09093 270 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 CT62P0C5K7 136 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 RFPL3SP0C7P2 107 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 ENDOUP21128 410 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 SOX18P35713 384 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 PIGAP37287 484 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 NUP107P57740 925 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF267Q14586 743 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC10A1Q14973 349 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 OR52E8Q6IFG1 317 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 LETMD1Q6P1Q0 360 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 RPS27LQ71UM5 84 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 CAMKMTQ7Z624 323 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 MILR1Q7Z6M3 343 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 LRRC25Q8N386 305 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 FBXW8Q8N3Y1 598 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 OR4F6Q8NGB9 312 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 IFT81Q8WYA0 676 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 ADIPOR1Q96A54 375 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 TP53INP1Q96A56 240 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 MRPL46Q9H2W6 279 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF395Q9H8N7 513 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 PNPLA3Q9NST1 481 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 CNIH4Q9P003 139 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 IKBKGQ9Y6K9 419 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
CLSTN3-203ENST00000534830 A0A087WUV0 522 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ANKRD33BA6NCL7 494 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 LRRC3CA6NJW4 275 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 A8MT66 165 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM171A2A8MVW0 826 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 POC1B-GALNT4F8VUJ3 575 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 BCKDKO14874 412 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SMIM24O75264 130 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 TRIM3O75382 744 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 LY6G6DO95868 133 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 PDYNP01213 254 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 KLK1P06870 262 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ABHD2P08910 425 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SNRPAP09012 282 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SERPINB3P29508 390 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SSTR4P31391 388 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 HSD17B3P37058 310 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 MGAT2Q10469 447 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 GALNT1Q10472 559 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 PMPCAQ10713 525 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM219BQ5XKK7 198 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 RNF111Q6ZNA4 994 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC29A4Q7RTT9 530 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 MNS1Q8NEH6 495 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 C17orf47Q8NEP4 570 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 OR10G3Q8NGC4 313 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 OR4K14Q8NGD5 310 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ATP6V1E2Q96A05 226 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 TM4SF18Q96CE8 201 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 MBD6Q96DN6 1003 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 SMC6Q96SB8 1091 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 TTYH2Q9BSA4 534 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 CNPPD1Q9BV87 410 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 MRPL1Q9BYD6 325 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 TXLNGYQ9BZA5 131 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF703Q9H7S9 590 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 WDR41Q9HAD4 459 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 BRF2Q9HAW0 419 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ZFP64Q9NPA5 681 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ACKR4Q9NPB9 350 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 RASSF1Q9NS23 344 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 FARSBQ9NSD9 589 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 QPCTLQ9NXS2 382 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 AHSPQ9NZD4 102 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF639Q9UID6 485 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 PCDHGB3Q9Y5G1 929 aa9.24□□□□□ -0.93
CLSTN3-203ENST00000534830 PCDHA9Q9Y5H5 950 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms