RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 B3GNT3Q9Y2A9 372 aa13□□□□□ -0.33
VPS11-205ENST00000534551 NTNG1Q9Y2I2 539 aa13□□□□□ -0.33
VPS11-205ENST00000534551 HEMK1Q9Y5R4 338 aaPredicted RBP13□□□□□ -0.33
VPS11-205ENST00000534551 SVILO95425 2214 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 SYNDIG1LA6NDD5 238 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 MYO1GB0I1T2 1018 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 SUV39H1O43463 412 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 DYRK3O43781 588 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 OR6B1O95007 311 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 NADKO95544 446 aaPredicted RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 MAPK1P28482 360 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 NTSP30990 170 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 GALNSP34059 522 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 CD96P40200 585 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 SOX3P41225 446 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 CDK9P50750 372 aaKnown RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 NME5P56597 212 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 OC90Q02509 493 aaPredicted RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 FUT7Q11130 342 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 HSPB3Q12988 150 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 ZNF169Q14929 603 aaPredicted RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 OR1C1Q15619 314 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 C6orf163Q5TEZ5 329 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 TMEM198Q66K66 360 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 SPINK14Q6IE38 97 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 TMEM64Q6YI46 380 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 LARP4Q71RC2 724 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS11-205ENST00000534551 FAM9CQ8IZT9 166 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 LGI4Q8N135 537 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 C16orf52Q8NHV5 167 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 PIWIL2Q8TC59 973 aaKnown RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 ART5Q96L15 291 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 AMDHD1Q96NU7 426 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 ITPAQ9BY32 194 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 WWTR1Q9GZV5 400 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 OR10A5Q9H207 317 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
VPS11-205ENST00000534551 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 MYOTQ9UBF9 498 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 BCAP29Q9UHQ4 241 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 PSME2Q9UL46 239 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 USH1CQ9Y6N9 552 aa12.99□□□□□ -0.33
VPS11-205ENST00000534551 PDPK1O15530 556 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 KLHL41O60662 606 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 NEURL1O76050 574 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 LAMP1P11279 417 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 LBPP18428 481 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 GPX3P22352 226 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 HPCAL1P37235 193 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ASMTP46597 345 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 TLE1Q04724 770 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 EMX2Q04743 252 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 C19orf57Q0VDD7 668 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 FHL5Q5TD97 284 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 WDR53Q7Z5U6 358 aaPredicted RBP12.98□□□□□ -0.33
VPS11-205ENST00000534551 PRR22Q8IZ63 422 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ARMC10Q8N2F6 343 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ZNF675Q8TD23 568 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 CTHRC1Q96CG8 243 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 MAGED4Q96JG8 741 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 MAGEB18Q96M61 343 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 EBF4Q9BQW3 602 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
VPS11-205ENST00000534551 RNF32Q9H0A6 362 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ASIC5Q9NY37 505 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ZNF639Q9UID6 485 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 ANAPC2Q9UJX6 822 aa12.98□□□□□ -0.33
VPS11-205ENST00000534551 EIF3LQ9Y262 564 aaKnown RBP12.98□□□□□ -0.33
VPS11-205ENST00000534551 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
VPS11-205ENST00000534551 NINQ8N4C6 2090 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 A0A0G2JMM0 328 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 A0A1W2PPB8 328 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 A0A1W2PRS3 328 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 KIR3DP1A8MWS1 328 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 TCP11X1B4DZS4 312 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 FCHO1O14526 889 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 ANKRD28O15084 1053 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 PRPS2P11908 318 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 CASRP41180 1078 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 SSR4P51571 173 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 NR0B1P51843 470 aaKnown RBP12.97□□□□□ -0.33
VPS11-205ENST00000534551 GUCY1A3Q02108 690 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 BIKQ13323 160 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 TLR1Q15399 786 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 NXNQ6DKJ4 435 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 LYPD8Q6UX82 237 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 SLC29A4Q7RTT9 530 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 HPS6Q86YV9 775 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 RIMKLAQ8IXN7 391 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 KIRREL3Q8IZU9 778 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 CYP4Z2PQ8N1L4 340 aa12.97□□□□□ -0.33
VPS11-205ENST00000534551 CISD2Q8N5K1 135 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms