RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 MYLK4Q86YV6 388 aaPredicted RBP19.48■□□□□ 0.71
SSH3-211ENST00000534112 CREG2Q8IUH2 290 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 TEX9Q8N6V9 391 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 ABTB1Q969K4 478 aaPredicted RBP19.48■□□□□ 0.71
SSH3-211ENST00000534112 ATOH8Q96SQ7 321 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 YIPF4Q9BSR8 244 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 DDX31Q9H8H2 851 aaKnown RBP19.48■□□□□ 0.71
SSH3-211ENST00000534112 CXorf21Q9HAI6 301 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 NMRAL1Q9HBL8 299 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 PCDHGA11Q9Y5H2 935 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 FREM3P0C091 2139 aa19.48■□□□□ 0.71
SSH3-211ENST00000534112 NSD1Q96L73 2696 aaPredicted RBP19.48■□□□□ 0.71
SSH3-211ENST00000534112 A0A1B0GTL3 188 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 TCRBV9S1A1TA0A576 114 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 KERAO60938 352 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 INHBBP09529 407 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 TMED10P49755 219 aaKnown RBP19.47■□□□□ 0.71
SSH3-211ENST00000534112 DCAF7P61962 342 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 WIPI1Q5MNZ9 446 aaPredicted RBP19.47■□□□□ 0.71
SSH3-211ENST00000534112 CYP20A1Q6UW02 462 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 CYS1Q717R9 158 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 ADIPOR1Q96A54 375 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 WDR41Q9HAD4 459 aa19.47■□□□□ 0.71
SSH3-211ENST00000534112 JMJD1CQ15652 2540 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 A0A1W2PS29 197 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 FAM159BA6NKW6 160 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 PGRMC2O15173 223 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 ZSCAN12O43309 604 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 AIFM1O95831 613 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 HRGP04196 525 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 CD53P19397 219 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 ADSLP30566 484 aaPredicted RBP19.46■□□□□ 0.71
SSH3-211ENST00000534112 SPRP35270 261 aaPredicted RBP19.46■□□□□ 0.71
SSH3-211ENST00000534112 NAGLUP54802 743 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 NRG3P56975 720 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 RPP38P78345 283 aaKnown RBP19.46■□□□□ 0.71
SSH3-211ENST00000534112 FUT7Q11130 342 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 LIPJQ5W064 366 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 TIGD3Q6B0B8 471 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 RAPH1Q70E73 1250 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 KRTAP1-3Q8IUG1 177 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 ZNF615Q8N8J6 731 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 C9orf106Q8NAJ2 232 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 ZPLD1Q8TCW7 415 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 NTNG2Q96CW9 530 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 TMEM41AQ96HV5 264 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 DACH2Q96NX9 599 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 SAYSD1Q9NPB0 183 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 FETUBQ9UGM5 382 aa19.46■□□□□ 0.71
SSH3-211ENST00000534112 H0YIV9 168 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 CT62P0C5K7 136 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 TMIGD3P0DMS9 266 aaPredicted RBP19.45■□□□□ 0.7
SSH3-211ENST00000534112 MTHFD2P13995 350 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 PTPN6P29350 595 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 PHEXP78562 749 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 CUL3Q13618 768 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 RCAN2Q14206 197 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 SETDB1Q15047 1291 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 POU4F3Q15319 338 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 PCBP2Q15366 365 aaKnown RBP eCLIP19.45■□□□□ 0.7
SSH3-211ENST00000534112 GRTP1Q5TC63 336 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 C3orf62Q6ZUJ4 267 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 CMC1Q7Z7K0 106 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 GALNT12Q8IXK2 581 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 PRR22Q8IZ63 422 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 RBM24Q9BX46 236 aaKnown RBP19.45■□□□□ 0.7
SSH3-211ENST00000534112 OR10A5Q9H207 317 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 ACTR8Q9H981 624 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 BEX4Q9NWD9 120 aaPredicted RBP19.45■□□□□ 0.7
SSH3-211ENST00000534112 ANGPTL3Q9Y5C1 460 aa19.45■□□□□ 0.7
SSH3-211ENST00000534112 A0A1W2PPR1 153 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 GNB5O14775 395 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 ERN1O75460 977 aaKnown RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 GBAP04062 536 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 LTA4HP09960 611 aaKnown RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 PIK3R1P27986 724 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 ABCD3P28288 659 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 SOX18P35713 384 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 SLCO1A2P46721 670 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 NKX6-1P78426 367 aaPredicted RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 FOXF2Q12947 444 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 CPSF6Q16630 551 aaKnown RBP eCLIP19.44■□□□□ 0.7
SSH3-211ENST00000534112 OR52E8Q6IFG1 317 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 CLEC9AQ6UXN8 241 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 TBC1D1Q86TI0 1168 aaPredicted RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 YRDCQ86U90 279 aaKnown RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 CTAGE3PQ8IX95 158 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 FAM83FQ8NEG4 500 aaPredicted RBP19.44■□□□□ 0.7
SSH3-211ENST00000534112 C17orf47Q8NEP4 570 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 OR1J4Q8NGS1 313 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 REPS1Q96D71 796 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 PSD3Q9NYI0 1048 aa19.44■□□□□ 0.7
SSH3-211ENST00000534112 FN1P02751 2386 aaKnown RBP19.43■□□□□ 0.7
SSH3-211ENST00000534112 KIAA1549Q9HCM3 1950 aa19.43■□□□□ 0.7
SSH3-211ENST00000534112 CCDC188H7C350 402 aa19.43■□□□□ 0.7
SSH3-211ENST00000534112 CDH16O75309 829 aa19.43■□□□□ 0.7
SSH3-211ENST00000534112 ACTL6AO96019 429 aa19.43■□□□□ 0.7
SSH3-211ENST00000534112 ABCB1P08183 1280 aaPredicted RBP19.43■□□□□ 0.7
SSH3-211ENST00000534112 CYP4B1P13584 511 aa19.43■□□□□ 0.7
SSH3-211ENST00000534112 CRABP2P29373 138 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms