RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	RABGAP1L	Q5R372	815 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NIPAL3	Q6P499	406 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CBLN3	Q6UW01	205 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PRUNE1	Q86TP1	453 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	FAM131B	Q86XD5	332 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PTOV1	Q86YD1	416 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ARL14	Q8N4G2	192 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	GPRC5A	Q8NFJ5	357 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PHYHIP	Q92561	330 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PIGT	Q969N2	578 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	PHF21A	Q96BD5	680 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	MRPL53	Q96EL3	112 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	RBM41	Q96IZ5	413 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	LRR1	Q96L50	414 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	RAB40C	Q96S21	281 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NACA2	Q9H009	215 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ZMYND12	Q9H0C1	365 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	GAN	Q9H2C0	597 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	TLE6	Q9H808	572 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	HPS4	Q9NQG7	708 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DDX28	Q9NUL7	540 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	BARHL2	Q9NY43	387 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	SPHK1	Q9NYA1	384 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	DLGAP4	Q9Y2H0	992 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	NSG2	Q9Y328	171 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	OVOS2	A0A0G2JMS6	1433 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	OVOS2	A0A0J9YW53	1432 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	OVOS2	Q6IE36	1432 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.18	□□□□□ -1.74
ATM-223	ENST00000533979	CDC42BPG	Q6DT37	1551 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	ZMYM6	O95789	1325 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	KIF16B	Q96L93	1317 aa		4.18	□□□□□ -1.74
ATM-223	ENST00000533979	GOLGB1	Q14789	3259 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	PLCH1	Q4KWH8	1693 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CCDC162P	A2VCL2	907 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	GSAP	A4D1B5	854 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ASB14	A6NK59	587 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ERVV-2	B6SEH9	535 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979		E9PI62	339 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CHEK1	O14757	476 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CASC3	O15234	703 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	SYT7	O43581	403 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	NEMF	O60524	1076 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CLN5	O75503	358 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CPNE6	O95741	557 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	IGHE	P01854	428 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ATP1A1	P05023	1023 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	F3	P13726	295 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ANXA8	P13928	327 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ANPEP	P15144	967 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CBL	P22681	906 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CHI3L1	P36222	383 aa	Predicted RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	OR3A3	P47888	321 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	GEM	P55040	296 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	MAZ	P56270	477 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	PHEX	P78562	749 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	RCN1	Q15293	331 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ODF4	Q2M2E3	257 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	POM121L1P	Q3SYA9	428 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	GPAT3	Q53EU6	434 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	PHYHD1	Q5SRE7	291 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	C20orf194	Q5TEA3	1177 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ANXA8L1	Q5VT79	327 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	PRAMEF20	Q5VT98	475 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	LIPK	Q5VXJ0	399 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ASPHD2	Q6ICH7	369 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	SLC39A4	Q6P5W5	647 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	MYOCD	Q8IZQ8	938 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CRYBG2	Q8N1P7	616 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	PRSS35	Q8N3Z0	413 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	TMEM99	Q8N816	258 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	SEPT8	Q92599	483 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ABTB1	Q969K4	478 aa	Predicted RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	SGK494	Q96LW2	274 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	NUSAP1	Q9BXS6	441 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	IQCG	Q9H095	443 aa	Known RBP	4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CLSTN2	Q9H4D0	955 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	MARCH7	Q9H992	704 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	FN3KRP	Q9HA64	309 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	EXOC1	Q9NV70	894 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	TBC1D13	Q9NVG8	400 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	TEKT2	Q9UIF3	430 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	KCNS2	Q9ULS6	477 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	B9D1	Q9UPM9	204 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	AP4B1	Q9Y6B7	739 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	NWD2	Q9ULI1	1742 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	CACNA1A	O00555	2505 aa		4.17	□□□□□ -1.74
ATM-223	ENST00000533979	ARHGEF10	O15013	1369 aa		4.16	□□□□□ -1.74
ATM-223	ENST00000533979	PLEKHH1	Q9ULM0	1364 aa		4.16	□□□□□ -1.74
ATM-223	ENST00000533979	SERTM2	A0A1B0GWG4	89 aa		4.16	□□□□□ -1.74
ATM-223	ENST00000533979	LILRA5	A6NI73	299 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms