RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ZNF843Q8N446 348 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 KAT2AQ92830 837 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 KIAA1143Q96AT1 154 aaPredicted RBP13.36□□□□□ -0.27
COL16A1-217ENST00000532877 RBM18Q96H35 190 aaKnown RBP13.36□□□□□ -0.27
COL16A1-217ENST00000532877 TUBB6Q9BUF5 446 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 PAIP1Q9H074 479 aaKnown RBP13.36□□□□□ -0.27
COL16A1-217ENST00000532877 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
COL16A1-217ENST00000532877 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 MAT2BQ9NZL9 334 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
COL16A1-217ENST00000532877 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
COL16A1-217ENST00000532877 FXYD1O00168 92 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 ERN1O75460 977 aaKnown RBP13.35□□□□□ -0.27
COL16A1-217ENST00000532877 ANP32DO95626 131 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 GSNP06396 782 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 CT62P0C5K7 136 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 MMP11P24347 488 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 GALNSP34059 522 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 SOAT1P35610 550 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 MNAT1P51948 309 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 OR4D2P58180 307 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 MGAT2Q10469 447 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 IL10RAQ13651 578 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 SPRED3Q2MJR0 410 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 GTDC1Q4AE62 458 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 FAM111BQ6SJ93 734 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 VWA5B2Q8N398 1253 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 OR7G2Q8NG99 324 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 FBXO27Q8NI29 283 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 DOK4Q8TEW6 326 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
COL16A1-217ENST00000532877 RIT1Q92963 219 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 EFCAB1Q9HAE3 211 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 IL1RL2Q9HB29 575 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 SLC25A37Q9NYZ2 338 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 C19orf25Q9UFG5 118 aaPredicted RBP13.35□□□□□ -0.27
COL16A1-217ENST00000532877 IL17BQ9UHF5 180 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 VPS4AQ9UN37 437 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 SNX8Q9Y5X2 465 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 HS3ST3B1Q9Y662 390 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
COL16A1-217ENST00000532877 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 TRBV5-3A0A0A0MS03 114 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 IGHV3-20A0A0C4DH32 117 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 A8MUA0 341 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 C17orf105B2RV13 164 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PLOD2O00469 737 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PCDH17O14917 1159 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 SLITRK5O94991 958 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 UNC5CO95185 931 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 IGHEP01854 428 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 IFI6P09912 130 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ZCCHC18P0CG32 403 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 LIFP15018 202 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PGDP52209 483 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 EEF1A2Q05639 463 aaKnown RBP13.34□□□□□ -0.27
COL16A1-217ENST00000532877 MAP4K2Q12851 820 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CLN3Q13286 438 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ART3Q13508 389 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 FHL5Q5TD97 284 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 HACD2Q6Y1H2 254 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ZNF621Q6ZSS3 439 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CCDC121Q6ZUS5 278 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CPEB2Q7Z5Q1 589 aaKnown RBP13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PPP1R32Q7Z5V6 425 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 VASH2Q86V25 355 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CLEC4FQ8N1N0 589 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 TRIML2Q8N7C3 387 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 OR5AK3PQ8NH89 298 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 OR14A16Q8NHC5 309 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 FGF11Q92914 225 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CTHRC1Q96CG8 243 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 LRRC58Q96CX6 371 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ELP4Q96EB1 424 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 FAM120BQ96EK7 910 aaKnown RBP13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CGREF1Q99674 301 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 WDR77Q9BQA1 342 aaPredicted RBP13.34□□□□□ -0.27
COL16A1-217ENST00000532877 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 VAPAQ9P0L0 249 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 PCDHB14Q9Y5E9 798 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
COL16A1-217ENST00000532877 A0A087WV62 115 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms