RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RABL3Q5HYI8 236 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 NANOGP8Q6NSW7 305 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 C16orf89Q6UX73 402 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 CPEB2Q7Z5Q1 589 aaKnown RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 VASH2Q86V25 355 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 VWA5B2Q8N398 1253 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 KIF2BQ8N4N8 673 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 AMER2Q8N7J2 671 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 DNAJB8Q8NHS0 232 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 PSMA8Q8TAA3 256 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 FAM120BQ96EK7 910 aaKnown RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 NAF1Q96HR8 494 aaKnown RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 ANKRD27Q96NW4 1050 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 GPR87Q9BY21 358 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 NANOGQ9H9S0 305 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 EQTNQ9NQ60 294 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 DDX18Q9NVP1 670 aaKnown RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 C19orf25Q9UFG5 118 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-205ENST00000531303 BCAP29Q9UHQ4 241 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 ERVK-19Q9WJR5 959 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 NEUROG3Q9Y4Z2 214 aa17.78■□□□□ 0.44
SMPD1-205ENST00000531303 TRBV5-3A0A0A0MS03 114 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 CLIC1O00299 241 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 TERTO14746 1132 aaKnown RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 EMC8O43402 210 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 HNRNPCL1O60812 293 aaKnown RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 SEC24DO94855 1032 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 NPPAP01160 153 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 ZCCHC18P0CG32 403 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 HOXB9P17482 250 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 SSTR4P31391 388 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 SOX18P35713 384 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 RASSF2P50749 326 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 TMEM205Q6UW68 189 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 C6orf120Q7Z4R8 191 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 NUP43Q8NFH3 380 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 ZNF675Q8TD23 568 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 ZFP90Q8TF47 636 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 KIAA1143Q96AT1 154 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 PHF12Q96QT6 1004 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 HOPXQ9BPY8 73 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 BTBD10Q9BSF8 475 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 THUMPD3Q9BV44 507 aaKnown RBP17.77■□□□□ 0.44
SMPD1-205ENST00000531303 OR8D2Q9GZM6 311 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 IKZF5Q9H5V7 419 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 TPT1P8Q9HAU6 139 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 NDE1Q9NXR1 346 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 ADA2Q9NZK5 511 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 PACSIN3Q9UKS6 424 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 MSRB2Q9Y3D2 182 aa17.77■□□□□ 0.44
SMPD1-205ENST00000531303 AKAP13Q12802 2813 aa17.77■□□□□ 0.43
SMPD1-205ENST00000531303 UPK1AO00322 258 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 DYRK3O43781 588 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 SLC6A2P23975 617 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 RPS26P62854 115 aaKnown RBP17.76■□□□□ 0.43
SMPD1-205ENST00000531303 PRR5P85299 388 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 MAP4K2Q12851 820 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 PGAM4Q8N0Y7 254 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 ZNF321PQ8N8H1 164 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 SENP5Q96HI0 755 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-205ENST00000531303 CDRT15Q96T59 188 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 CPPED1Q9BRF8 314 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-205ENST00000531303 GPATCH1Q9BRR8 931 aaKnown RBP17.76■□□□□ 0.43
SMPD1-205ENST00000531303 YIPF4Q9BSR8 244 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 PIF1Q9H611 641 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 PTGFRNQ9P2B2 879 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 KCND3Q9UK17 655 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 HS3ST3B1Q9Y662 390 aa17.76■□□□□ 0.43
SMPD1-205ENST00000531303 PLOD2O00469 737 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 IGHEP01854 428 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 LIFP15018 202 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 GALNSP34059 522 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 SLC7A2P52569 658 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 FHL5Q5TD97 284 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 C8orf82Q6P1X6 216 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 PAPD4Q6PIY7 484 aaKnown RBP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 TMEM64Q6YI46 380 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 YTHDF3Q7Z739 585 aaKnown RBP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 RNF130Q86XS8 419 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 C7orf57Q8NEG2 295 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 OR52R1Q8NGF1 315 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 OR56A1Q8NGH5 318 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 SFXN5Q8TD22 340 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 DAZLQ92904 295 aaKnown RBP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 CTHRC1Q96CG8 243 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 THTPAQ9BU02 230 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 C1orf21Q9H246 121 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 CMTM6Q9NX76 183 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 L3MBTL1Q9Y468 752 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 EVPLLA8MZ36 301 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 PLOD3O60568 738 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 KRT75O95678 551 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 CBX7O95931 251 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 CYC1P08574 325 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 S1PR1P21453 382 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 MMP11P24347 488 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 SRSF6Q13247 344 aaKnown RBP17.75■□□□□ 0.43
SMPD1-205ENST00000531303 IL10RAQ13651 578 aa17.75■□□□□ 0.43
SMPD1-205ENST00000531303 SSPNQ14714 243 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms