RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 MAPK10P53779 464 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 CHRNB3Q05901 458 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 TP53BP2Q13625 1128 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 ZNF750Q32MQ0 723 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 MED25Q71SY5 747 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 RAB11FIP2Q7L804 512 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 AGBL5Q8NDL9 886 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 CATSPER1Q8NEC5 780 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 WDR36Q8NI36 951 aaKnown RBP19.88■□□□□ 0.77
VPS28-212ENST00000530836 MIPOL1Q8TD10 442 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 PPWD1Q96BP3 646 aaKnown RBP19.88■□□□□ 0.77
VPS28-212ENST00000530836 SLC35G5Q96KT7 338 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 A4GALTQ9NPC4 353 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 AKAP7Q9P0M2 348 aaPredicted RBP19.88■□□□□ 0.77
VPS28-212ENST00000530836 RIMS3Q9UJD0 308 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 SRPK3Q9UPE1 567 aa19.88■□□□□ 0.77
VPS28-212ENST00000530836 A0A1W2PNU3 283 aaPredicted RBP19.87■□□□□ 0.77
VPS28-212ENST00000530836 MED26O95402 600 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 SERPINA1P01009 418 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 ARAFP10398 606 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 FASP25445 335 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 CSTF2P33240 577 aaKnown RBP eCLIP19.87■□□□□ 0.77
VPS28-212ENST00000530836 CDK6Q00534 326 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 SCARB2Q14108 478 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 OR9A2Q8NGT5 310 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 NRSN2Q9GZP1 204 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 ANGPT4Q9Y264 503 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 LOXL2Q9Y4K0 774 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 PTPRBP23467 1997 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 PEX1O43933 1283 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 FGF17O60258 216 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 CTNSO60931 367 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 IFNA14P01570 189 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 NUDT7P0C024 238 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 SLC35E2P0CK97 266 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 KHKP50053 298 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 DUSP2Q05923 314 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 TRIP10Q15642 601 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 TMEM107Q6UX40 140 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 TTLL10Q6ZVT0 673 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 CCDC80Q76M96 950 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 BPHLQ86WA6 291 aaPredicted RBP19.87■□□□□ 0.77
VPS28-212ENST00000530836 NRG4Q8WWG1 115 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 PKP2Q99959 881 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 HCN3Q9P1Z3 774 aa19.87■□□□□ 0.77
VPS28-212ENST00000530836 A0A087WV62 115 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 TRABD2BA6NFA1 517 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 FAM227AF5H4B4 570 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 PLD2O14939 933 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 DSCR3O14972 297 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 ZNF749O43361 778 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 MATN1P21941 496 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 HSD17B7P56937 341 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 GNA13Q14344 377 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 FKBP9P1Q75LS8 142 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 SZRD1Q7Z422 152 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 LILRA2Q8N149 483 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 HORMAD2Q8N7B1 307 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 TMEM102Q8N9M5 508 aaPredicted RBP19.86■□□□□ 0.77
VPS28-212ENST00000530836 NUP43Q8NFH3 380 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 OR51Q1Q8NH59 317 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 ZNF675Q8TD23 568 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 COL26A1Q96A83 441 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 ANKRD9Q96BM1 317 aaPredicted RBP19.86■□□□□ 0.77
VPS28-212ENST00000530836 PEX11GQ96HA9 241 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 PYURFQ96I23 114 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 OR1F2PQ96R84 312 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 POLR1BQ9H9Y6 1135 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 ADPRHL2Q9NX46 363 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 SATB2Q9UPW6 733 aa19.86■□□□□ 0.77
VPS28-212ENST00000530836 A0A1B0GX78 115 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 AGRPO00253 132 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 ASNA1O43681 348 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 B4GALT2O60909 372 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 LDB3O75112 727 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 MC3RP41968 323 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 EEF1A2Q05639 463 aaKnown RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 DSG2Q14126 1118 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 LRRC23Q53EV4 343 aaPredicted RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 C3orf38Q5JPI3 329 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 OGFRL1Q5TC84 451 aaPredicted RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 REEP3Q6NUK4 255 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 CBLL1Q75N03 491 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 EIF3MQ7L2H7 374 aaKnown RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 PATL1Q86TB9 770 aaKnown RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 OR4N5Q8IXE1 308 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 OR2L13Q8N349 312 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 TMEM52Q8NDY8 209 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 ADCY4Q8NFM4 1077 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 FBXO30Q8TB52 745 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 LRTOMTQ8WZ04 291 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 MAL2Q969L2 176 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 SLC47A1Q96FL8 570 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 SEPHS2Q99611 448 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 CHID1Q9BWS9 393 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 ASPSCR1Q9BZE9 553 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 KLHL4Q9C0H6 718 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 AGPAT4Q9NRZ5 378 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 DDX18Q9NVP1 670 aaKnown RBP19.85■□□□□ 0.77
VPS28-212ENST00000530836 P2RX2Q9UBL9 471 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms