RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 GMPPBQ9Y5P6 360 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.66
USP35-207ENST00000530546 LEUTXA8MZ59 168 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SH3BP5O60239 455 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 GCM2O75603 506 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 DNTTP04053 509 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 DNAJA1P31689 397 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 MVDP53602 400 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SLAMF1Q13291 335 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SCARB2Q14108 478 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 MAD2L1BPQ15013 274 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 FBXO43Q4G163 708 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 ARMCX4Q5H9R4 360 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TOR2AQ5JU69 321 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SLC46A3Q7Z3Q1 461 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TSPYL5Q86VY4 417 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 ADGRF3Q8IZF5 1079 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 OR8H2Q8N162 312 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 ELSPBP1Q96BH3 223 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CXorf40BQ96DE9 158 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CEP19Q96LK0 163 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 NEDD4LQ96PU5 975 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SLC17A9Q9BYT1 436 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 LMAN2LQ9H0V9 348 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 C14orf119Q9NWQ9 140 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 THUMPD1Q9NXG2 353 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 AHSPQ9NZD4 102 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KLHL21Q9UJP4 597 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 POLHQ9Y253 713 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CFL2Q9Y281 166 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 TRIM3O75382 744 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 PCGF2P35227 344 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KIR2DL1P43626 348 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 RPS21P63220 83 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 PDE7AQ13946 482 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SYT16Q17RD7 645 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TMEM196Q5HYL7 178 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 C10orf62Q5T681 223 aaPredicted RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 NDUFAF5Q5TEU4 345 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 LAIR1Q6GTX8 287 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 RD3Q7Z3Z2 195 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 AMER3Q8N944 861 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 OR52J3Q8NH60 311 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 UCN3Q969E3 161 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 EXOSC8Q96B26 276 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 TBC1D20Q96BZ9 403 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 FYTTD1Q96QD9 318 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 C17orf62Q9BQA9 187 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 C3orf14Q9HBI5 128 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 PRDM8Q9NQV8 689 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 WDR70Q9NW82 654 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CA5BQ9Y2D0 317 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 A0A075B6Q4 140 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 ALPPP05187 535 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 FPR1P21462 350 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 IGFALSP35858 605 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KRT20P35900 424 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TRIM23P36406 574 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 RPL3P39023 403 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 LIMK1P53667 647 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CLDN2P57739 230 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KCNJ10P78508 379 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TIGD6Q17RP2 521 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TOR1AIP1Q5JTV8 583 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SZRD1Q7Z422 152 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 PGBD3Q8N328 593 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 OR52N2Q8NGI0 321 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 LRRC20Q8TCA0 184 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 CAMK1GQ96NX5 476 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 MENTQ9BUN1 341 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 C1QTNF7Q9BXJ2 289 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 MS4A8Q9BY19 250 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KCNN2Q9H2S1 579 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 CXorf36Q9H7Y0 433 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 LIN7BQ9HAP6 207 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 MAT2BQ9NZL9 334 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 EIF3KQ9UBQ5 218 aaKnown RBP10.95□□□□□ -0.66
USP35-207ENST00000530546 ACSL5Q9ULC5 683 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 KLHL20Q9Y2M5 609 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 SNX11Q9Y5W9 270 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 ATG2AQ2TAZ0 1938 aa10.95□□□□□ -0.66
USP35-207ENST00000530546 TRBV23OR9-2A0A075B6M9 112 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TRIM77I1YAP6 450 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 M0R082 166 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TNFRSF21O75509 655 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 OR7A10O76100 309 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 SEMG1P04279 462 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 CEACAM5P06731 702 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 COL9A1P20849 921 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 EPHA2P29317 976 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 PTGER1P34995 402 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 HSPB3Q12988 150 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 EFR3AQ14156 821 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 ARHGAP19Q14CB8 494 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TMEM31Q5JXX7 168 aa10.94□□□□□ -0.66
USP35-207ENST00000530546 TNFAIP8L2Q6P589 184 aaPredicted RBP10.94□□□□□ -0.66
USP35-207ENST00000530546 DEDD2Q8WXF8 326 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms