RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 P2RY10O00398 339 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 UBE2CO00762 179 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 RRP8O43159 456 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 RTN2O75298 545 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF821O75541 412 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ZMPSTE24O75844 475 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 LSM8O95777 96 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 MOCS2O96007 188 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 LIPFP07098 398 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 KRT5P13647 590 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 PDGFRAP16234 1089 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 HNRNPA2B1P22626 353 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ANOS1P23352 680 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 AKT2P31751 481 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 CHRNA3P32297 505 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 TIMP3P35625 211 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 DUSP3P51452 185 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 UCNP55089 124 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 HNRNPKP61978 463 aaKnown RBP eCLIP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 KRTAP24-1Q3LI83 254 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 IGSF11Q5DX21 431 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 CFAP58Q5T655 872 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 PIP5KL1Q5T9C9 394 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 KLC3Q6P597 504 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 C19orf48Q6RUI8 117 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 FAM198BQ6UWH4 519 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 LRRC31Q6UY01 552 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ERN2Q76MJ5 926 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 MARK2Q7KZI7 788 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 HORMAD1Q86X24 394 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF677Q86XU0 584 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF595Q8IYB9 648 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 OR8H2Q8N162 312 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 SLC25A45Q8N413 288 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 CPSF7Q8N684 471 aaKnown RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 EID2Q8N6I1 236 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 DCAF4L2Q8NA75 395 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 AVL9Q8NBF6 648 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 TMEM35BQ8NCS4 154 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 SLC24A4Q8NFF2 622 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 OR52K2Q8NGK3 314 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 OR4C6Q8NH72 309 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 RAB7BQ96AH8 199 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 OXNAD1Q96HP4 312 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 PPP1R16AQ96I34 528 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF578Q96N58 590 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 RPRD1AQ96P16 312 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 PSMB7Q99436 277 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 EPYCQ99645 322 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 TXLNGYQ9BZA5 131 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ANKZF1Q9H8Y5 726 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 SLC35C2Q9NQQ7 365 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.32□□□□□ -1.721e-8■□□□□ 9.6
CSDE1-212ENST00000529046 NLGN3Q9NZ94 848 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 ERRFI1Q9UJM3 462 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 MAGED1Q9Y5V3 778 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-212ENST00000529046 BPTFQ12830 3046 aa4.32□□□□□ -1.72
CSDE1-212ENST00000529046 BAHCC1Q9P281 2608 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 SPTY2D1-AS1A0A0U1RR47 76 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 ELOVL7A1L3X0 281 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 A6NL46 340 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 XPNPEP2O43895 674 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 CSF2P04141 144 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 CTSLP07711 333 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 THEGLP0DJG4 465 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 GIMD1P0DJR0 217 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 ALPPL2P10696 532 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 FGF5P12034 268 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 CYP11B1P15538 503 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF18P17022 549 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 TCEA1P23193 301 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 OR1E1P30953 314 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 RABIFP47224 123 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 PSMD8P48556 350 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 STK19P49842 368 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 THOP1P52888 689 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 METAP1P53582 386 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 GSCP56915 257 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 UBE2HP62256 183 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 RPS21P63220 83 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 CNTN1Q12860 1018 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 SNTB1Q13884 538 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 KRT33BQ14525 404 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 IL11RAQ14626 422 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 RBBP5Q15291 538 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 PTPN20Q4JDL3 420 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 ERMARDQ5T6L9 678 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 HES3Q5TGS1 186 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 KLHL10Q6JEL2 608 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 RPUSD3Q6P087 351 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 FIGLAQ6QHK4 219 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 MEX3BQ6ZN04 569 aaKnown RBP4.31□□□□□ -1.72
CSDE1-212ENST00000529046 FAM183BPQ6ZVS7 135 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 ERICH1Q86X53 443 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 CACUL1Q86Y37 369 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 FAM114A1Q8IWE2 563 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 LMNTD1Q8N9Z9 388 aa4.31□□□□□ -1.72
CSDE1-212ENST00000529046 MCUQ8NE86 351 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms