RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 RPS13P62277 151 aaKnown RBP10.55□□□□□ -0.72
CMTM1-211ENST00000528484 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
CMTM1-211ENST00000528484 DEPDC1Q5TB30 811 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 C18orf63Q68DL7 685 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 AAGABQ6PD74 315 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 ANGPTL8Q6UXH0 198 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 YTHDF3Q7Z739 585 aaKnown RBP10.55□□□□□ -0.72
CMTM1-211ENST00000528484 ANKMY2Q8IV38 441 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 GALNT12Q8IXK2 581 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 LAS2Q8IYD9 372 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 C9orf106Q8NAJ2 232 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 OR7G3Q8NG95 312 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 ESAMQ96AP7 390 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 CD244Q9BZW8 370 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 UBQLN3Q9H347 655 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 UBTD1Q9HAC8 227 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 OPTCQ9UBM4 332 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 PACSIN3Q9UKS6 424 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 CFL2Q9Y281 166 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
CMTM1-211ENST00000528484 K7EPI3 171 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PRAMEF4O60810 478 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 RCBTB2O95199 551 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 EPB42P16452 691 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 CHMP24386 653 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PTX3P26022 381 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PIK3R1P27986 724 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PIK3CBP42338 1070 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 CASP3P42574 277 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 SRYQ05066 204 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PRAMEF9Q5VWM5 478 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 BICRALQ6AI39 1079 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 OR52E8Q6IFG1 317 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 TMEM64Q6YI46 380 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 DGAT2L6Q6ZPD8 337 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 CHMP1BQ7LBR1 199 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 CXXC5Q7LFL8 322 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 P4HA3Q7Z4N8 544 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 YRDCQ86U90 279 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 IFNEQ86WN2 208 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 CXorf67Q86X51 503 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 GRAMD2AQ8IUY3 354 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 SPATA6LQ8N4H0 392 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 ZNF441Q8N8Z8 693 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 FAM83FQ8NEG4 500 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 OR14L1PQ8NHC6 308 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 HUS1BQ8NHY5 278 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 STAG3L4Q8TBR4 150 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 DOK4Q8TEW6 326 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 WNT2BQ93097 391 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 INTS12Q96CB8 462 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PERPQ96FX8 193 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 OSBPL9Q96SU4 736 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 SORBS1Q9BX66 1292 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 DDX47Q9H0S4 455 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 ACTR8Q9H981 624 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 NUDT4Q9NZJ9 180 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 KLRF1Q9NZS2 232 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 FETUBQ9UGM5 382 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PTBP2Q9UKA9 531 aaKnown RBP10.54□□□□□ -0.72
CMTM1-211ENST00000528484 PPP2R2CQ9Y2T4 447 aa10.54□□□□□ -0.72
CMTM1-211ENST00000528484 GLOD5A6NK44 160 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 KIAA1324LA8MWY0 1029 aaPredicted RBP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 SUPT3HB4E1H0 165 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 PLPP1O14494 284 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 PHGDHO43175 533 aaKnown RBP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 SUPT3HO75486 399 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 SMNDC1O75940 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 RHOXF2BP0C7M4 288 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 FAM58BPP0C7Q3 252 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 CPN1P15169 458 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 CD1DP15813 335 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 NT5EP21589 574 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 ABCD3P28288 659 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 SSTR4P31391 388 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 NAGLUP54802 743 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 HNRNPH2P55795 449 aaKnown RBP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 PDIA2Q13087 525 aaKnown RBP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 OR4D1Q15615 310 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 DCST1Q5T197 706 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 OR2A2Q6IF42 318 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 SLC30A6Q6NXT4 461 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 RAPH1Q70E73 1250 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 NUDT13Q86X67 352 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 FBXO36Q8NEA4 188 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 OR7G1Q8NGA0 311 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 FAM111AQ96PZ2 611 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 MTERF1Q99551 399 aaKnown RBP10.53□□□□□ -0.72
CMTM1-211ENST00000528484 MDFIQ99750 246 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 TUBA1CQ9BQE3 449 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
CMTM1-211ENST00000528484 OSBPL11Q9BXB4 747 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms