RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 TRBV5-3A0A0A0MS03 114 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 EBAG9O00559 213 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 UBOX5O94941 541 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 CPSF4O95639 269 aaKnown RBP20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 DDAH2O95865 285 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 CT62P0C5K7 136 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 COX6A1P12074 109 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 MC3RP41968 323 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 CDKN2CP42773 168 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 GPR143P51810 404 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 PCOLCEQ15113 449 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 PAPD4Q6PIY7 484 aaKnown RBP20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 TMEM107Q6UX40 140 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 HACD2Q6Y1H2 254 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 MRGPREQ86SM8 312 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 NFAM1Q8NET5 270 aaPredicted RBP20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 OR7G2Q8NG99 324 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 OR7G1Q8NGA0 311 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 SFXN5Q8TD22 340 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 IMMP1LQ96LU5 166 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 NPAS2Q99743 824 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 C3orf14Q9HBI5 128 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 SLAMF8Q9P0V8 285 aa20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 C19orf53Q9UNZ5 99 aaPredicted RBP20.52■□□□□ 0.88
PACSIN3-205ENST00000528462 MED19A0JLT2 244 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 UPK1AO00322 258 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 BCAS2O75934 225 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 PSMG1O95456 288 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 ABCB1P08183 1280 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 ESRRAP11474 423 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 UQCRC2P22695 453 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 OTX2P32243 289 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 MRPS35P82673 323 aaKnown RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 PRR5P85299 388 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 TRMT12Q53H54 448 aaKnown RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 BHLHB9Q6PI77 547 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 FAM111BQ6SJ93 734 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 ZNF621Q6ZSS3 439 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 NDUFAF7Q7L592 441 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 DHDDSQ86SQ9 333 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 B3GNT7Q8NFL0 401 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 KAT2AQ92830 837 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 FAM120BQ96EK7 910 aaKnown RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 SLC6A13Q9NSD5 602 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 GID8Q9NWU2 228 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 PCDHB14Q9Y5E9 798 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 DMXL2Q8TDJ6 3036 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 ANKRD11Q6UB99 2663 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 IGHV3-20A0A0C4DH32 117 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 EMC8O43402 210 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 CBX7O95931 251 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 PTGER1P34995 402 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 CCT3P49368 545 aaKnown RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 BNIP1Q12981 228 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 GAB1Q13480 694 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 NFYCQ13952 458 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 ZNF267Q14586 743 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 OR1N1Q8NGS0 311 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 SLC2A12Q8TD20 617 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 CCNL2Q96S94 520 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 SEMA4CQ9C0C4 833 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 DDX18Q9NVP1 670 aaKnown RBP20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 SLC25A37Q9NYZ2 338 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 SNX8Q9Y5X2 465 aa20.51■□□□□ 0.87
PACSIN3-205ENST00000528462 URB1O60287 2271 aaKnown RBP20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 A8MUA0 341 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 FXYD1O00168 92 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 AIM2O14862 343 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 KLK10O43240 276 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 ANP32DO95626 131 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 EIF2S3P41091 472 aaKnown RBP20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 PGDP52209 483 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 EEF1A2Q05639 463 aaKnown RBP20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 EXT1Q16394 746 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 PLAG1Q6DJT9 500 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 MSRB3Q8IXL7 192 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 OR56A1Q8NGH5 318 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 ZNF721Q8TF20 911 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 LRRC58Q96CX6 371 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 NAF1Q96HR8 494 aaKnown RBP20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 CGREF1Q99674 301 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 P4HTMQ9NXG6 502 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 VAPAQ9P0L0 249 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 ERVK-19Q9WJR5 959 aa20.5■□□□□ 0.87
PACSIN3-205ENST00000528462 NSG1A0A0A6YYJ2 146 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 HRKO00198 91 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 SEC24DO94855 1032 aaPredicted RBP20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 HPP00738 406 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 GSNP06396 782 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 KRT16P08779 473 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 SLC37A1P57057 533 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 SLC26A5P58743 744 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 C8orf82Q6P1X6 216 aaPredicted RBP20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 DNAJC14Q6Y2X3 702 aaPredicted RBP20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 ZNF615Q8N8J6 731 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 APCDD1LQ8NCL9 501 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 ZFP90Q8TF47 636 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 THAP4Q8WY91 577 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 NEURL3Q96EH8 262 aa20.49■□□□□ 0.87
PACSIN3-205ENST00000528462 CNPPD1Q9BV87 410 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms