RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 OR10H2O60403 315 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ULK1O75385 1050 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 PDE9AO76083 593 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 KRT6AP02538 564 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 KRT6BP04259 564 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ATP1B1P05026 303 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ENO1P06733 434 aaKnown RBP9.81□□□□□ -0.84
CD44-227ENST00000528086 CHRNGP07510 517 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 PORP16435 677 aaPredicted RBP9.81□□□□□ -0.84
CD44-227ENST00000528086 PCSK2P16519 638 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ENDOUP21128 410 aaKnown RBP9.81□□□□□ -0.84
CD44-227ENST00000528086 CNR1P21554 472 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 GPX3P22352 226 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 TACR1P25103 407 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 PIK3R1P27986 724 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ALDH3A1P30838 453 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD44-227ENST00000528086 KRT6CP48668 564 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 EMDP50402 254 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 TRA2BP62995 288 aaKnown RBP9.81□□□□□ -0.84
CD44-227ENST00000528086 BIKQ13323 160 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 CEBPEQ15744 281 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 NTRK2Q16620 822 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 HYAL4Q2M3T9 481 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 CCDC153Q494R4 210 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ZNF628Q5EBL2 1059 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 CLEC6AQ6EIG7 209 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 RNF111Q6ZNA4 994 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 RTL4Q6ZR62 310 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 Q6ZSR9 355 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 GOLM1Q8NBJ4 401 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 POGLUT1Q8NBL1 392 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 OR5L2Q8NGL0 311 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 TMEM125Q96AQ2 219 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ZBTB9Q96C00 473 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 NXF5Q9H1B4 397 aaKnown RBP9.81□□□□□ -0.84
CD44-227ENST00000528086 DEFB127Q9H1M4 99 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 OR10A5Q9H207 317 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 PPCSQ9HAB8 311 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 TIMMDC1Q9NPL8 285 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 AHSPQ9NZD4 102 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 GRID1Q9ULK0 1009 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ERVK-11Q9UQG0 969 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 HCFC1P51610 2035 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 CSMD1Q96PZ7 3565 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 ARHGAP21Q5T5U3 1957 aa9.81□□□□□ -0.84
CD44-227ENST00000528086 FAM166BA8MTA8 275 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 NPIPB8E9PQR5 432 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 KLRC4-KLRK1H3BQV0 150 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 COPEO14579 308 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 TYROBPO43914 113 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PCDH7O60245 1069 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 SPAG7O75391 227 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 ERAL1O75616 437 aaKnown RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 SLU7O95391 586 aaKnown RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 IGHG3P01860 377 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PRF1P14222 555 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 COX7A2P14406 83 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 HMOX2P30519 316 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PTGDSP41222 190 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 ETV4P43268 484 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 MAGEA5P43359 124 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 FBXW4P57775 412 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PPIAP62937 165 aaKnown RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 MRPS35P82673 323 aaKnown RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 BTKQ06187 659 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 MPP2Q14168 576 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PRAMEF20Q5VT98 475 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 LIPMQ5VYY2 423 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 FAM71E1Q6IPT2 247 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 OPN5Q6U736 354 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PAGE2Q7Z2X7 111 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 GALNT12Q8IXK2 581 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PRR22Q8IZ63 422 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 GHDCQ8N2G8 530 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 MREGQ8N565 214 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 GBP7Q8N8V2 638 aaPredicted RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 RDH11Q8TC12 318 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 APOPT1Q96IL0 206 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 EGLN2Q96KS0 407 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 FCRL1Q96LA6 429 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 SGCZQ96LD1 299 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 GAL3ST4Q96RP7 486 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PELOQ9BRX2 385 aaKnown RBP9.8□□□□□ -0.84
CD44-227ENST00000528086 TMEM109Q9BVC6 243 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 WDR41Q9HAD4 459 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 TNFRSF10DQ9UBN6 386 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 COPS7AQ9UBW8 275 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 PDZD2O15018 2839 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 CSMD2Q7Z408 3487 aa9.8□□□□□ -0.84
CD44-227ENST00000528086 C2orf92A0A1B0GVN3 265 aa9.79□□□□□ -0.84
CD44-227ENST00000528086 OR6C76A6NM76 312 aa9.79□□□□□ -0.84
CD44-227ENST00000528086 C17orf51A8MQB3 221 aa9.79□□□□□ -0.84
CD44-227ENST00000528086 TFECO14948 347 aaPredicted RBP9.79□□□□□ -0.84
CD44-227ENST00000528086 TRIM3O75382 744 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms