RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AIFM1O95831 613 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 CDH3P22223 829 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 CD40LGP29965 261 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 NTSP30990 170 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 CD97P48960 835 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 KHKP50053 298 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 XKP51811 444 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 OLR1P78380 273 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 LSM11P83369 360 aaKnown RBP eCLIP16.58■□□□□ 0.24
USH1C-205ENST00000527020 KRT33BQ14525 404 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 TOR1AIP1Q5JTV8 583 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 C18orf63Q68DL7 685 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 PODNL1Q6PEZ8 512 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 FAM92BQ6ZTR7 304 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 JPH3Q8WXH2 748 aaPredicted RBP16.58■□□□□ 0.24
USH1C-205ENST00000527020 FGF14Q92915 247 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 MGLLQ99685 303 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 CHCHD6Q9BRQ6 235 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 SARGQ9BW04 601 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 POLR2J3Q9H1A7 115 aaKnown RBP16.58■□□□□ 0.24
USH1C-205ENST00000527020 DNAJC27Q9NZQ0 273 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 MOSPD1Q9UJG1 213 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 KLK4Q9Y5K2 254 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 TICRRQ7Z2Z1 1910 aa16.58■□□□□ 0.24
USH1C-205ENST00000527020 A0A1W2PRQ8 180 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 RNGTTO60942 597 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 AHRP35869 848 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 PPP5CP53041 499 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 PRKAG1P54619 331 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 SSX1Q16384 188 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 PARM1Q6UWI2 310 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 CCDC116Q8IYX3 515 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 TMEM145Q8NBT3 493 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 OR2L5Q8NG80 312 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 OR14C36Q8NHC7 312 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 SFXN5Q8TD22 340 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 APOOQ9BUR5 198 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 TAPBPLQ9BX59 468 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 APOBEC3BQ9UH17 382 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 KCNE3Q9Y6H6 103 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 A3GALT2U3KPV4 340 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 UGT2B17O75795 530 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 HMGN2P05204 90 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 C8orf89P0DMQ9 161 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 CERS1P27544 350 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 PPP2R1BP30154 601 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 MAT2AP31153 395 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 MAN2A2P49641 1150 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 TARDBPQ13148 414 aaKnown RBP eCLIP16.57■□□□□ 0.24
USH1C-205ENST00000527020 LASP1Q14847 261 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 MED22Q15528 200 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 TSTQ16762 297 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 ITPRIPL2Q3MIP1 535 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 SYCE2Q6PIF2 218 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 KRT73Q86Y46 540 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 CACTIN-AS1Q8N1I8 211 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 KBTBD8Q8NFY9 601 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 OR6T1Q8NGN1 323 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 WDR36Q8NI36 951 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 BBS10Q8TAM1 723 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 GANCQ8TET4 914 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 C16orf58Q96GQ5 468 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 DZANK1Q9NVP4 752 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 TRNAU1APQ9NX07 287 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 CCDC59Q9P031 241 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 FBXW2Q9UKT8 454 aa16.57■□□□□ 0.24
USH1C-205ENST00000527020 LSM2Q9Y333 95 aaKnown RBP16.57■□□□□ 0.24
USH1C-205ENST00000527020 AGAP5A6NIR3 686 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 H3BN98 237 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 ARHGAP33O14559 1287 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 LGI1O95970 557 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 MMP11P24347 488 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 SMIM11AP58511 58 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 ABATP80404 500 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 ZNF425Q6IV72 752 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 BCDIN3DQ7Z5W3 292 aaKnown RBP16.56■□□□□ 0.24
USH1C-205ENST00000527020 ZER1Q7Z7L7 766 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 MORN4Q8NDC4 146 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 SCARF2Q96GP6 870 aaPredicted RBP16.56■□□□□ 0.24
USH1C-205ENST00000527020 Q96MT0 163 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 OPALINQ96PE5 141 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 GPA33Q99795 319 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 FGF22Q9HCT0 170 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 IRAK4Q9NWZ3 460 aa16.56■□□□□ 0.24
USH1C-205ENST00000527020 LINC01565O15544 149 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 TPST2O60704 377 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 KCNJ13O60928 360 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 NME6O75414 186 aaPredicted RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 PORP16435 677 aaPredicted RBP16.55■□□□□ 0.24
USH1C-205ENST00000527020 PBX2P40425 430 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 ADPRHP54922 357 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 RAB8AP61006 207 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 DNASE1L3Q13609 305 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 LRRC32Q14392 662 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 SLC48A1Q6P1K1 146 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 TMEM107Q6UX40 140 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 PLEKHG7Q6ZR37 379 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 NUDT18Q6ZVK8 323 aa16.55■□□□□ 0.24
USH1C-205ENST00000527020 IQCF1Q8N6M8 205 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms