RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 ADGRE4PQ86SQ3 457 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 PRR22Q8IZ63 422 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
CPSF1-201ENST00000526271 RHOXF2Q9BQY4 288 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 ROGDIQ9GZN7 287 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
CPSF1-201ENST00000526271 CXorf21Q9HAI6 301 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 ZDHHC18Q9NUE0 388 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 TEX10Q9NXF1 929 aaPredicted RBP13.03□□□□□ -0.32
CPSF1-201ENST00000526271 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
CPSF1-201ENST00000526271 HMX2A2RU54 273 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 CD8B2A6NJW9 211 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 GBAP04062 536 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 DRD2P14416 443 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 PLTPP55058 493 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 ATP6V0D1P61421 351 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 DUSP2Q05923 314 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 MGAT2Q10469 447 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 FUT7Q11130 342 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 RPS6KA2Q15349 733 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 PAGE2BQ5JRK9 111 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 TEX35Q5T0J7 233 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 CAMKMTQ7Z624 323 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 IFT20Q8IY31 132 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 CENPLQ8N0S6 344 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-201ENST00000526271 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.33
CPSF1-201ENST00000526271 GOT1L1Q8NHS2 421 aaPredicted RBP13.02□□□□□ -0.33
CPSF1-201ENST00000526271 FBXO25Q8TCJ0 367 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 DIO2Q92813 273 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 TANKQ92844 425 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 RIT1Q92963 219 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 CMTM7Q96FZ5 175 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.33
CPSF1-201ENST00000526271 ZNF597Q96LX8 424 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 MDFIQ99750 246 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 DDX31Q9H8H2 851 aaKnown RBP13.02□□□□□ -0.33
CPSF1-201ENST00000526271 ANKZF1Q9H8Y5 726 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 TSC22D4Q9Y3Q8 395 aa13.02□□□□□ -0.33
CPSF1-201ENST00000526271 CUBNO60494 3623 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 SONP18583 2426 aaKnown RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 TUBAL3A6NHL2 446 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 C17orf51A8MQB3 221 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 KIAA1324LA8MWY0 1029 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 FAM47E-STBD1D6RA91 191 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 K7EPI3 171 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 COX7A2P14406 83 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 SERPINB3P29508 390 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 ECHS1P30084 290 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 HPDP32754 393 aaPredicted RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 PIK3CGP48736 1102 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NEK2P51955 445 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 RAB10P61026 200 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 IRF9Q00978 393 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 LIX1Q8N485 282 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 EIF1ADQ8N9N8 165 aaKnown RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 WDR20Q8TBZ3 569 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 HGDQ93099 445 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 RGMAQ96B86 450 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NXNL1Q96CM4 212 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 C18orf12Q96KH6 178 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 TRIB1Q96RU8 372 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NODALQ96S42 347 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NXF5Q9H1B4 397 aaKnown RBP13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NUDT4Q9NZJ9 180 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 RNF112Q9ULX5 631 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 CAMK2AQ9UQM7 478 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 WIF1Q9Y5W5 379 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 NPFFR2Q9Y5X5 522 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
CPSF1-201ENST00000526271 DSCAMO60469 2012 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 IQANK1A0A1B0GTG1 560 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 C2orf72A6NCS6 295 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 GNB5O14775 395 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 KERAO60938 352 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 TRAPPC6AO75865 159 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 ABCB1P08183 1280 aaPredicted RBP13□□□□□ -0.33
CPSF1-201ENST00000526271 INHBBP09529 407 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 SLC35E2P0CK97 266 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 STMN1P16949 149 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 GPX3P22352 226 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 CTSSP25774 331 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 GALNSP34059 522 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 PIK3CBP42338 1070 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 DCAF7P61962 342 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 SORDQ00796 357 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 HIST2H2ACQ16777 129 aaPredicted RBP13□□□□□ -0.33
CPSF1-201ENST00000526271 TIGD3Q6B0B8 471 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 HIST2H2AA3Q6FI13 130 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 SLC29A4Q7RTT9 530 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 BIVMQ86UB2 503 aa13□□□□□ -0.33
CPSF1-201ENST00000526271 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
CPSF1-201ENST00000526271 TEX9Q8N6V9 391 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms