RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PTGFRNQ9P2B2 879 aa14.8□□□□□ -0.04
TSPAN4-213ENST00000524895 ERVK-11Q9UQG0 969 aa14.8□□□□□ -0.04
TSPAN4-213ENST00000524895 MSRB2Q9Y3D2 182 aa14.8□□□□□ -0.04
TSPAN4-213ENST00000524895 CLCA3PQ9Y6N3 262 aa14.8□□□□□ -0.04
TSPAN4-213ENST00000524895 PLOD2O00469 737 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 TERTO14746 1132 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 EMC8O43402 210 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 IFI6P09912 130 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 CT62P0C5K7 136 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 PPIBP23284 216 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 CPOXP36551 454 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 KNTC1P50748 2209 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 EEF1A2Q05639 463 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 MGAT2Q10469 447 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 MAP4K2Q12851 820 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 ZNF267Q14586 743 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 CROCCQ5TZA2 2017 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 ZNF771Q7L3S4 317 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 CPEB2Q7Z5Q1 589 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 DEFB107AQ8IZN7 70 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 WDFY3Q8IZQ1 3526 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 ZFP90Q8TF47 636 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 PTPMT1Q8WUK0 201 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 DAZLQ92904 295 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 SLC7A6OSQ96CW6 309 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 SH3GL1Q99961 368 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 GPATCH1Q9BRR8 931 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 BTBD10Q9BSF8 475 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 TPT1P8Q9HAU6 139 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 SPAG4Q9NPE6 437 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 TAS2R1Q9NYW7 299 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 ERVK-19Q9WJR5 959 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 PCDHGA6Q9Y5G7 932 aa14.79□□□□□ -0.04
TSPAN4-213ENST00000524895 A0A087WV62 115 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 IGHV3-20A0A0C4DH32 117 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 EVPLLA8MZ36 301 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 CLIC1O00299 241 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 PLOD3O60568 738 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 COQ9O75208 318 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 KRT75O95678 551 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 F8A1P23610 371 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 SLC6A2P23975 617 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 MMP11P24347 488 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 OTX2P32243 289 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 SLC7A2P52569 658 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 PRKAG1P54619 331 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 MTPNP58546 118 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 TGIF1Q15583 401 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 TRMT12Q53H54 448 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 RUNDC3AQ59EK9 446 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 NANOGP8Q6NSW7 305 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 C8orf82Q6P1X6 216 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 OR2L13Q8N349 312 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 NUP43Q8NFH3 380 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 OR8J3Q8NGG0 315 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 PNPT1Q8TCS8 783 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 C8orf44Q96CB5 159 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 CTHRC1Q96CG8 243 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 NEURL3Q96EH8 262 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 FBXL20Q96IG2 436 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 SLC35G5Q96KT7 338 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 ART5Q96L15 291 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 MS4A4EQ96PG1 132 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 LPAR4Q99677 370 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 CPPED1Q9BRF8 314 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 THUMPD3Q9BV44 507 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 OR8D2Q9GZM6 311 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 LRMDAQ9H2I8 198 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 ANKRA2Q9H9E1 313 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 NANOGQ9H9S0 305 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 C19orf53Q9UNZ5 99 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 CORO2BQ9UQ03 480 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 L3MBTL1Q9Y468 752 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 HS3ST3B1Q9Y662 390 aa14.78□□□□□ -0.04
TSPAN4-213ENST00000524895 SEC16AO15027 2179 aa14.77□□□□□ -0.04
TSPAN4-213ENST00000524895 SAGE2PA6NJ88 616 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 UPK1AO00322 258 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 SSPNQ14714 243 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 EXOSC7Q15024 291 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 RABL3Q5HYI8 236 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 FHL5Q5TD97 284 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 SAXO2Q658L1 398 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 PAPD4Q6PIY7 484 aaKnown RBP14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 BNC2Q6ZN30 1099 aaPredicted RBP14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 C6orf120Q7Z4R8 191 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 RAB43Q86YS6 212 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 MORN4Q8NDC4 146 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 OR52R1Q8NGF1 315 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 SLC2A12Q8TD20 617 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 TMEM125Q96AQ2 219 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 MESP1Q9BRJ9 268 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 EFHD1Q9BUP0 239 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 RAD21L1Q9H4I0 556 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 EQTNQ9NQ60 294 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 ADA2Q9NZK5 511 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 COPS7AQ9UBW8 275 aa14.77□□□□□ -0.05
TSPAN4-213ENST00000524895 BCAP29Q9UHQ4 241 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms