RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	IFI44L	Q53G44	452 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ARMCX4	Q5H9R4	360 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ATAD3C	Q5T2N8	411 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CRTC1	Q6UUV9	634 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	SPATC1	Q76KD6	591 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	TSPAN33	Q86UF1	283 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	VRK3	Q8IV63	474 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	LGI4	Q8N135	537 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CYP4Z2P	Q8N1L4	340 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	C1orf52	Q8N6N3	182 aa	Known RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF366	Q8N895	744 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	C11orf65	Q8NCR3	313 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	LILRB4	Q8NHJ6	448 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	FIBIN	Q8TAL6	211 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CXorf40B	Q96DE9	158 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ST6GAL2	Q96JF0	529 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	RNF170	Q96K19	258 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	LMLN	Q96KR4	655 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033		Q96MT0	163 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CAMK1G	Q96NX5	476 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	OPALIN	Q96PE5	141 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	OR2A14	Q96R47	310 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	PANX1	Q96RD7	426 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	FEV	Q99581	238 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	NIPSNAP1	Q9BPW8	284 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CCM2	Q9BSQ5	444 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	DUSP26	Q9BV47	211 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	SCNM1	Q9BWG6	230 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	C6orf62	Q9GZU0	229 aa	Predicted RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	RACGAP1	Q9H0H5	632 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	TP63	Q9H3D4	680 aa	Predicted RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	BRF2	Q9HAW0	419 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	SLC25A19	Q9HC21	320 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ENAM	Q9NRM1	1142 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	RLIM	Q9NVW2	624 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	GPATCH2	Q9NW75	528 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ADPRHL2	Q9NX46	363 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ARL15	Q9NXU5	204 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF282	Q9UDV7	671 aa	Predicted RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	KCND3	Q9UK17	655 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	EXO1	Q9UQ84	846 aa	Known RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CFL2	Q9Y281	166 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	CAB39	Q9Y376	341 aa	Predicted RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	RBMX2	Q9Y388	322 aa	Known RBP	7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033		V9GYH0	126 aa		7.42	□□□□□ -1.22
SPIDR-223	ENST00000524033	ANKRD34B	A5PLL1	514 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	C1QTNF9B	B2RNN3	333 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033		H0YIV9	168 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033		K7ERQ8	282 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	SMAD6	O43541	496 aa	Known RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	HYAL3	O43820	417 aa	Predicted RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	KIAA0513	O60268	411 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	GPX5	O75715	221 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	UGT2B17	O75795	530 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	SLITRK5	O94991	958 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	SEMA3D	O95025	777 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CPSF4	O95639	269 aa	Known RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	DNTT	P04053	509 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	GSTM1	P09488	218 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	C1QTNF9	P0C862	333 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF8	P17098	575 aa	Predicted RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ALOX12	P18054	663 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CD70	P32970	193 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ACSL1	P33121	698 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	S100A5	P33763	92 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	HTR3A	P46098	478 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	RPS5	P46782	204 aa	Known RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	RFX2	P48378	723 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CSNK1E	P49674	416 aa	Known RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	SEPHS1	P49903	392 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	AFF3	P51826	1226 aa	Known RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	NKX2-5	P52952	324 aa	Predicted RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	NUDT6	P53370	316 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CRISP3	P54108	245 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ST8SIA6	P61647	398 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	RHAG	Q02094	409 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	BCL2L1	Q07817	233 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CHIT1	Q13231	466 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	EXOC3L2	Q2M3D2	409 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	TIMM50	Q3ZCQ8	353 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ANXA8L1	Q5VT79	327 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	RNLS	Q5VYX0	342 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	LRRC66	Q68CR7	880 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF770	Q6IQ21	691 aa	Predicted RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF544	Q6NX49	715 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	UNQ6494/PRO21346	Q6UXR6	183 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	GDPGP1	Q6ZNW5	385 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF621	Q6ZSS3	439 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	HEATR4	Q86WZ0	1026 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CACUL1	Q86Y37	369 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	SYTL1	Q8IYJ3	562 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	APCDD1	Q8J025	514 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	CLIP4	Q8N3C7	705 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	RNF175	Q8N4F7	328 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	ZNF557	Q8N988	423 aa	Predicted RBP	7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	OR52N2	Q8NGI0	321 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.41	□□□□□ -1.22	1e-6	■■■■□ 23.9
SPIDR-223	ENST00000524033	GANC	Q8TET4	914 aa		7.41	□□□□□ -1.22
SPIDR-223	ENST00000524033	APOBEC4	Q8WW27	367 aa	Known RBP	7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms