RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 PACS2Q86VP3 889 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CCDC71Q8IV32 467 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 LRRC25Q8N386 305 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 VWA5B2Q8N398 1253 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 C17orf47Q8NEP4 570 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SELENOMQ8WWX9 145 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 TTYH2Q9BSA4 534 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 ENKD1Q9H0I2 346 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CXorf21Q9HAI6 301 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 BRF2Q9HAW0 419 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 MCCC2Q9HCC0 563 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 ACKR4Q9NPB9 350 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 SEMA4BQ9NPR2 832 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 TEX10Q9NXF1 929 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 ALKBH4Q9NXW9 302 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 TRPS1Q9UHF7 1281 aa8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 CHCHD2Q9Y6H1 151 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-240ENST00000523912 C1orf226A1L170 272 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ANKRD33BA6NCL7 494 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 LRRC3CA6NJW4 275 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 TRAPPC6AO75865 159 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZWINTO95229 277 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ESRRBO95718 433 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 CELA3AP09093 270 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 GLI4P10075 376 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 HSD3B1P14060 373 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 CD1EP15812 388 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PORP16435 677 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 CSNK2A2P19784 350 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 HSD3B2P26439 372 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 SSTR4P31391 388 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZFP36L2P47974 494 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 TRA2BP62995 288 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PSPHP78330 225 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 FUT7Q11130 342 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 MYBPHQ13203 477 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 RASA2Q15283 850 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 EMC4Q5J8M3 183 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 TEX35Q5T0J7 233 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 RIPPLY2Q5TAB7 128 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 TRMT10CQ7L0Y3 403 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 IFT20Q8IY31 132 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PM20D2Q8IYS1 436 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 SAMD14Q8IZD0 417 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 METTL4Q8N3J2 472 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 CEP112Q8N8E3 955 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF441Q8N8Z8 693 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 NOA1Q8NC60 698 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 OR4F6Q8NGB9 312 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 NEIL3Q8TAT5 605 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 TRPC4APQ8TEL6 797 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 DOK4Q8TEW6 326 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF483Q8TF39 744 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 DCAKDQ8WVC6 231 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 KLHL29Q96CT2 875 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 NSUN5Q96P11 429 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF559Q9BR84 538 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 MRPL1Q9BYD6 325 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 BRINP2Q9C0B6 783 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 OR10A5Q9H207 317 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 METTL7AQ9H8H3 244 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PFDN4Q9NQP4 134 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 GIMAP4Q9NUV9 329 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF358Q9NW07 568 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PRODH2Q9UF12 536 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 KCNN3Q9UGI6 736 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 CNOT11Q9UKZ1 510 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PCDHGB3Q9Y5G1 929 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 PCDHA9Q9Y5H5 950 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 ZNF780BQ9Y6R6 833 aa8.15□□□□□ -1.1
CTNNA1-240ENST00000523912 NAV3Q8IVL0 2385 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 HSPB2A8KAH6 182 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 A8MT66 165 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 PGRMC2O15173 223 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 ACOX3O15254 700 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 ERAL1O75616 437 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 TOXO94900 526 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 LRATO95237 230 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 ATP1B1P05026 303 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 IGFBP2P18065 325 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 HMOX2P30519 316 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 ALDH9A1P49189 494 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 FBXW4P57775 412 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 DCAF7P61962 342 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 PLCXD2Q0VAA5 305 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 CSTF3Q12996 717 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 TOMM20Q15388 145 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 HSPB2Q16082 182 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 ERCC6LQ2NKX8 1250 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 SPIN4Q56A73 249 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 CES4AQ5XG92 561 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 SLC48A1Q6P1K1 146 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 LETMD1Q6P1Q0 360 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 GPRIN3Q6ZVF9 776 aa8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 WDR53Q7Z5U6 358 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-240ENST00000523912 TMEM200AQ86VY9 491 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms