RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PCID2Q5JVF3 399 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 GARNL3Q5VVW2 1013 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 TMEM205Q6UW68 189 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 PRSS41Q7RTY9 318 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 GALNTL5Q7Z4T8 443 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ANKRD37Q7Z713 158 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 SDCCAG8Q86SQ7 713 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KIAA1328Q86T90 577 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CRLF3Q8IUI8 442 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CCDC170Q8IYT3 715 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CCDC89Q8N998 374 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 TMEM178AQ8NBL3 297 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 FAM98AQ8NCA5 519 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 OR51Q1Q8NH59 317 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 HMGCLL1Q8TB92 370 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ZCCHC10Q8TBK6 192 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 MCOLN3Q8TDD5 553 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 C1orf54Q8WWF1 131 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 OR2A5Q96R48 311 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CYTH2Q99418 400 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 PKP4Q99569 1192 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 P2RY12Q9H244 342 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 TSPY26PQ9H489 355 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CDCP1Q9H5V8 836 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 UTP6Q9NYH9 597 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 GALPQ9UBC7 116 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 RIMKLBQ9ULI2 386 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 ZNF148Q9UQR1 794 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 CRYL1Q9Y2S2 319 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 KLK4Q9Y5K2 254 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 EPN1Q9Y6I3 576 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 NUP210LQ5VU65 1888 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 MTORP42345 2549 aa4.91□□□□□ -1.62
CTNNA1-239ENST00000523685 HIVEP1P15822 2718 aa4.9□□□□□ -1.62
CTNNA1-239ENST00000523685 A0A1W2PQ72 361 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ZNF860A6NHJ4 632 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TXNDC9O14530 226 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 NDC80O14777 642 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 LIASO43766 372 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 CDC40O60508 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 RDH16O75452 317 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PDE9AO76083 593 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TSPAN12O95859 305 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 SLC16A8O95907 504 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 CATP04040 527 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TPOP07202 933 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 SP1P08047 785 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ADH4P08319 380 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ZSCAN5DPP0CG00 497 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 HKR1P10072 659 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 EZRP15311 586 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ZNF24P17028 368 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 AGAP20933 346 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 RPS3P23396 243 aaKnown RBP eCLIP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 GABRB3P28472 473 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 STIP1P31948 543 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PTGER1P34995 402 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 RFC3P40938 356 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ART1P52961 327 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TAS2R50P59544 299 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 BASP1P80723 227 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PRDX1Q06830 199 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 CUL1Q13616 776 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 FAM53BQ14153 422 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 KCNJ11Q14654 390 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 KRT72Q14CN4 511 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ABRAXAS2Q15018 415 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 NSDHLQ15738 373 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 EXT1Q16394 746 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 DEPDC1Q5TB30 811 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 SEL1L2Q5TEA6 688 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ZNF425Q6IV72 752 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 SLC25A25Q6KCM7 469 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 MRNIPQ6NTE8 343 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PGBD2Q6P3X8 592 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 MZT2AQ6P582 158 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 Q6ZPB1 254 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TMEM200AQ86VY9 491 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 LRRC6Q86X45 466 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 DOLPP1Q86YN1 238 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 GHDCQ8N2G8 530 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 KIF2BQ8N4N8 673 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 CPSF7Q8N684 471 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 SLC5A8Q8N695 610 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 LRRC57Q8N9N7 239 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 MDS2Q8NDY4 140 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TMEM171Q8WVE6 324 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 TSLPQ969D9 159 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 C14orf79Q96F83 325 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 FBXL20Q96IG2 436 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 PRAP1Q96NZ9 151 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 BIRC8Q96P09 236 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 NPAS2Q99743 824 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 MCCC2Q9HCC0 563 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ANKHQ9HCJ1 492 aa4.9□□□□□ -1.63
CTNNA1-239ENST00000523685 ZBTB26Q9HCK0 441 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms