RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 PDK4Q16654 411 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 TMEM30BQ3MIR4 351 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 IQCCQ4KMZ1 466 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 ERICH5Q6P6B1 374 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PODNL1Q6PEZ8 512 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 Q6ZSR9 355 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 NANOGNBQ7Z5D8 188 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PIGWQ7Z7B1 504 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 GRAMD2AQ8IUY3 354 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 LACC1Q8IV20 430 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 LRTM2Q8N967 370 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 SLC37A3Q8NCC5 494 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PAQR8Q8TEZ7 354 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PIK3R3Q92569 461 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 RPGRIP1Q96KN7 1286 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 PITPNM3Q9BZ71 974 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 VCX3BQ9H321 246 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 TMEM161AQ9NX61 479 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 DBF4Q9UBU7 674 aaPredicted RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
SKP1-211ENST00000523359 HBS1LQ9Y450 684 aaKnown RBP4.32□□□□□ -1.72
SKP1-211ENST00000523359 HELTA6NFD8 242 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 PRSS46E5RG02 174 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ZNF195O14628 629 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FLRT2O43155 660 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 EDIL3O43854 480 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 KHDRBS3O75525 346 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 GLCEO94923 617 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 SEC24AO95486 1093 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 PAK4O96013 591 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 SERPINA3P01011 423 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FHP07954 510 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ANKRD34CP0C6C1 535 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 SLC2A2P11168 524 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 ANXA13P27216 316 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 CCND3P30281 292 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 SFTPDP35247 375 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 CDX1P47902 265 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 SLC6A12P48065 614 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 CNN1P51911 297 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 CCNHP51946 323 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 HNRNPFP52597 415 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 BLVRAP53004 296 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 CRYBB1P53674 252 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 SULT2A1Q06520 285 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ARHGAP1Q07960 439 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 XRCC4Q13426 336 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ITGA9Q13797 1035 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 BTG3Q14201 252 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 NCF4Q15080 339 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 PDK3Q15120 406 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ANKRD55Q3KP44 614 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 GPAT3Q53EU6 434 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 IFI44LQ53G44 452 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.31□□□□□ -1.72
SKP1-211ENST00000523359 SPOUT1Q5T280 376 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 NCR3LG1Q68D85 454 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 PWWP2BQ6NUJ5 590 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 TTC27Q6P3X3 843 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 CASC4Q6P4E1 433 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 SLC25A47Q6Q0C1 308 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 EFL1Q7Z2Z2 1120 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 TPRA1Q86W33 373 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FAM228AQ86W67 206 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 C12orf56Q8IXR9 622 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 RCOR2Q8IZ40 523 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 GPR137CQ8N3F9 429 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 TCAIMQ8N3R3 496 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 DNAAF3Q8N9W5 541 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 STKLD1Q8NE28 680 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 TRPV1Q8NER1 839 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 OR5AP2Q8NGF4 316 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 DDI1Q8WTU0 396 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 TSEN15Q8WW01 171 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 APOBEC4Q8WW27 367 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 ESAMQ96AP7 390 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 C16orf58Q96GQ5 468 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 GMPPAQ96IJ6 420 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 MAGED4Q96JG8 741 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 SPAG8Q99932 426 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 C19orf43Q9BQ61 176 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FUCA2Q9BTY2 467 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FICDQ9BVA6 458 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 TRIM62Q9BVG3 475 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 GON7Q9BXV9 100 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 MRPL13Q9BYD1 178 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 WDR13Q9H1Z4 485 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 SLC26A1Q9H2B4 701 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 AZI2Q9H6S1 392 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 RNF121Q9H920 327 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 PSTPIP2Q9H939 334 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 RAVER2Q9HCJ3 691 aaKnown RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 MAN2C1Q9NTJ4 1040 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 RNF186Q9NXI6 227 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 ATXN10Q9UBB4 475 aa4.31□□□□□ -1.72
SKP1-211ENST00000523359 FOXA2Q9Y261 457 aaPredicted RBP4.31□□□□□ -1.72
SKP1-211ENST00000523359 A0A087X002 238 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 FAM240BA0A1B0GVZ2 78 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms