RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ROGDIQ9GZN7 287 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 REXO4Q9GZR2 422 aaKnown RBP5.74□□□□□ -1.49
PABPC1-220ENST00000522658 LIME1Q9H400 295 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 DEPPQ9NTK1 212 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 NDRG3Q9UGV2 375 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 CORO1CQ9ULV4 474 aaPredicted RBP5.74□□□□□ -1.49
PABPC1-220ENST00000522658 CAMK2AQ9UQM7 478 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 FAM215AQ9Y5M1 114 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 NF1P21359 2839 aa5.74□□□□□ -1.49
PABPC1-220ENST00000522658 HEATR5BQ9P2D3 2071 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 A0A0G2JMM0 328 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 GOLGA6L10A0A0M3HER8 536 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 IQANK1A0A1B0GTG1 560 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 A0A1B0GVC2 190 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 A0A1W2PPB8 328 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 A0A1W2PRS3 328 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PINLYPA6NC86 204 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 KIR3DP1A8MWS1 328 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TP53I11O14683 189 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SMAD7O15105 426 aaKnown RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 OR10H2O60403 315 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TRAPPC6AO75865 159 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 HAUS5O94927 633 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TTC4O95801 387 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 KRT14P02533 472 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 S100BP04271 92 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CCL3P10147 92 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PGAM1P18669 254 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 KRT15P19012 456 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SERPINB3P29508 390 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PPP2R1BP30154 601 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TLX1P31314 330 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 OPRM1P35372 400 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CPOXP36551 454 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PIGAP37287 484 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SSR2P43308 183 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 KCNJ1P48048 391 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 HNMTP50135 292 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 RAP1GDS1P52306 607 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SLC12A2P55011 1212 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 DIO3P55073 304 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 MTTPP55157 894 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 DLX5P56178 289 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SORDQ00796 357 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 GTF3C1Q12789 2109 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ASPHQ12797 758 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ZNF549Q6P9A3 640 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TMIGD1Q6UXZ0 262 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CYHR1Q6ZMK1 362 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 C16orf47Q6ZP98 133 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ADAMTSL2Q86TH1 951 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 THOC6Q86W42 341 aaKnown RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 KLHDC8AQ8IYD2 350 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TAGAPQ8N103 731 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SNX31Q8N9S9 440 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ADCY4Q8NFM4 1077 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 OR4K1Q8NGD4 311 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 OR8K3Q8NH51 312 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 OR56A3Q8NH54 315 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 NEIL3Q8TAT5 605 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SLC2A12Q8TD20 617 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 GRK7Q8WTQ7 553 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ZBTB8AQ96BR9 441 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CAPZA3Q96KX2 299 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SERPINB12Q96P63 405 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TRIB1Q96RU8 372 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SERINC2Q96SA4 455 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 NAP1L3Q99457 506 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CCL19Q99731 98 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CNPPD1Q9BV87 410 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 RBM24Q9BX46 236 aaKnown RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CAPS2Q9BXY5 557 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ALOXE3Q9BYJ1 711 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SLC6A15Q9H2J7 730 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ACBD3Q9H3P7 528 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ZNF703Q9H7S9 590 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 CNOT10Q9H9A5 744 aaKnown RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 DLL4Q9NR61 685 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 QPCTLQ9NXS2 382 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 TUBA8Q9NY65 449 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 WWOXQ9NZC7 414 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ZNF629Q9UEG4 869 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 RPH3AQ9Y2J0 694 aaPredicted RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 REXO2Q9Y3B8 237 aaKnown RBP5.73□□□□□ -1.49
PABPC1-220ENST00000522658 ATG4BQ9Y4P1 393 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PCDHGB3Q9Y5G1 929 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 HCFC1P51610 2035 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 SCN3AQ9NY46 2000 aa5.73□□□□□ -1.49
PABPC1-220ENST00000522658 PHF3Q92576 2039 aaKnown RBP5.72□□□□□ -1.49
PABPC1-220ENST00000522658 TCRBV7S3A2A0A539 114 aa5.72□□□□□ -1.49
PABPC1-220ENST00000522658 AHRRA9YTQ3 701 aa5.72□□□□□ -1.49
PABPC1-220ENST00000522658 H0Y3Z8 333 aa5.72□□□□□ -1.49
PABPC1-220ENST00000522658 SYT5O00445 386 aa5.72□□□□□ -1.49
PABPC1-220ENST00000522658 PRKNO60260 465 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-220ENST00000522658 GLSO94925 669 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-220ENST00000522658 C8BP07358 591 aa5.72□□□□□ -1.49
PABPC1-220ENST00000522658 TMIGD3P0DMS9 266 aaPredicted RBP5.72□□□□□ -1.49
PABPC1-220ENST00000522658 CYP4B1P13584 511 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms