RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CPXM1Q96SM3 734 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 Q9HAA7 133 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 P2RX2Q9UBL9 471 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 TUBGCP4Q9UGJ1 667 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 SH3BGRL2Q9UJC5 107 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 TMCC3Q9ULS5 477 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 B9D1Q9UPM9 204 aa3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 MRPS28Q9Y2Q9 187 aaKnown RBP3.84□□□□□ -1.79
HMGB1P1-201ENST00000522557 SYNJ2O15056 1496 aa3.84□□□□□ -1.8
HMGB1P1-201ENST00000522557 IGKV3D-15A0A087WSY6 115 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ARHGEF33A8MVX0 844 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 FBP2O00757 339 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 SOCS3O14543 225 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 PEX11AO75192 247 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 TOM1L1O75674 476 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 GOT2P00505 430 aaKnown RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 LYNP07948 512 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 HCKP08631 526 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 NCF1P14598 390 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 EZRP15311 586 aaKnown RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 TMOD1P28289 359 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ADSSP30520 456 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 HSF2Q03933 536 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ELP6Q0PNE2 266 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ENPP2Q13822 863 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 LINC00242Q5T6M2 205 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ZNF613Q6PF04 617 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ATRAIDQ6UW56 229 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 MCM10Q7L590 875 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 CHMP1BQ7LBR1 199 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 GOLGA7Q7Z5G4 137 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 KCNMB4Q86W47 210 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 FADS6Q8N9I5 356 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 AQP11Q8NBQ7 271 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 GMCL1P1Q8NEA9 526 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 NUP37Q8NFH4 326 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 CCDC110Q8TBZ0 833 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 SPPL2AQ8TCT8 520 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 SELENOMQ8WWX9 145 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 TRIM44Q96DX7 344 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 RBM24Q9BX46 236 aaKnown RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 CALHM2Q9HA72 323 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 SPHK2Q9NRA0 654 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ERVK-18Q9QC07 812 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 PURGQ9UJV8 347 aaKnown RBP3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 SPATA2Q9UM82 520 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 MGAT4BQ9UQ53 548 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 AP1M2Q9Y6Q5 423 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 GON4LQ3T8J9 2241 aa3.83□□□□□ -1.8
HMGB1P1-201ENST00000522557 ABCC4O15439 1325 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 OAS1P00973 400 aaKnown RBP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 IGHG3P01860 377 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 IGHDP01880 384 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ACADVLP49748 655 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 TMEM50BP56557 158 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 RPS27AP62979 156 aaKnown RBP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 NME3Q13232 169 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ZNF146Q15072 292 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 CARTPTQ16568 116 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 CDKN3Q16667 212 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 MOGAT2Q3SYC2 334 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 TMEM41BQ5BJD5 291 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 LDLRAP1Q5SW96 308 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 WLSQ5T9L3 541 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 LCLAT1Q6UWP7 414 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ASRGL1Q7L266 308 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 NUFIP2Q7Z417 695 aaKnown RBP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 RANBP3LQ86VV4 465 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 GRAMD2AQ8IUY3 354 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 TBC1D10CQ8IV04 446 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 CCDC36Q8IYA8 594 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ZNF491Q8N8L2 437 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 GTF3AQ92664 365 aaKnown RBP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ADIPOR1Q96A54 375 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 RAB7BQ96AH8 199 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ATXN7L3BQ96GX2 97 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 ART5Q96L15 291 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 RCHY1Q96PM5 261 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 LGMNQ99538 433 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 CCDC28BQ9BUN5 200 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 FGFBP2Q9BYJ0 223 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 PLEKHA3Q9HB20 300 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 VAT1LQ9HCJ6 419 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 THYN1Q9P016 225 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 NIP7Q9Y221 180 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 MFHAS1Q9Y4C4 1052 aa3.82□□□□□ -1.8
HMGB1P1-201ENST00000522557 IQCMA0A1B0GVH7 501 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 BCLAF3A2AJT9 711 aaKnown RBP3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 PDLIM1O00151 329 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 CPLX1O14810 134 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 NOL3O60936 208 aaKnown RBP3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 VPS26AO75436 327 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 DUS4LO95620 317 aaKnown RBP3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 RNF224P0DH78 156 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 HSPA5P11021 654 aaKnown RBP3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 KIF5BP33176 963 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 MATKP42679 507 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 TAF6P49848 677 aa3.81□□□□□ -1.8
HMGB1P1-201ENST00000522557 FKBP3Q00688 224 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms