RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CDKN3Q16667 212 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PHKG1Q16816 387 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 GGTA1PQ4G0N0 100 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 SPECC1LQ69YQ0 1117 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 UQCC3Q6UW78 93 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ZNF600Q6ZNG1 722 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 COLCA1Q6ZS62 124 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 STXBP4Q6ZWJ1 553 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 MON1BQ7L1V2 547 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NDUFAF7Q7L592 441 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 VPS36Q86VN1 386 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 LDLRAD3Q86YD5 345 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 GPSM1Q86YR5 675 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TMEM139Q8IV31 216 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PYROXD2Q8N2H3 581 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PRSS35Q8N3Z0 413 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 FBXL16Q8N461 479 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PQLC3Q8N755 202 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 KLHDC1Q8N7A1 406 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 SLC44A5Q8NCS7 719 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PPFIBP2Q8ND30 876 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NFAM1Q8NET5 270 aaPredicted RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 OR4A15Q8NGL6 344 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 RHEBL1Q8TAI7 183 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 NANPQ8TBE9 248 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 MAIP1Q8WWC4 291 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 CIDECQ96AQ7 238 aaPredicted RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 MYEOVQ96EZ4 313 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PELI1Q96FA3 418 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 C20orf24Q9BUV8 137 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TSSK1BQ9BXA7 367 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 RHOJQ9H4E5 214 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ELOVL6Q9H5J4 265 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ZNF665Q9H7R5 613 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TLE6Q9H808 572 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
SKP1-209ENST00000522552 RNF121Q9H920 327 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 LYRM4Q9HD34 91 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 ZDHHC18Q9NUE0 388 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 POT1Q9NUX5 634 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PLEK2Q9NYT0 353 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 WWOXQ9NZC7 414 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PITPNC1Q9UKF7 332 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 SLC22A14Q9Y267 594 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 RASD1Q9Y272 281 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 KLHDC2Q9Y2U9 406 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 TSC22D4Q9Y3Q8 395 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PPIAL4AQ9Y536 164 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 OR1A2Q9Y585 309 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 PTPRUQ92729 1446 aa3.66□□□□□ -1.82
SKP1-209ENST00000522552 SH3PXD2BA1X283 911 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 C2CD4BA6NLJ0 364 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 TMCO5BA8MYB1 307 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 HHLA1C9JL84 531 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 SLC28A2O43868 658 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 CRTAPO75718 401 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 OR2F2O95006 317 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 PAPSS2O95340 614 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 GSTT2P0CG29 244 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 GSTT2BP0CG30 244 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 EGR2P11161 476 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 CCL2P13500 99 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ZNF23P17027 643 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ACKR3P25106 362 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 OTX1P32242 354 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 SPAM1P38567 509 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 CCNG1P51959 295 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ARHGDIAP52565 204 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ARHGDIBP52566 201 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 PLA2G16P53816 162 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 CX3CL1P78423 397 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 KLC1Q07866 573 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 CEACAM7Q14002 265 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 GANABQ14697 944 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 STK38Q15208 465 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ACSF3Q4G176 576 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 MIDNQ504T8 468 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ZNF776Q68DI1 518 aaPredicted RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 CLEC6AQ6EIG7 209 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 DOK6Q6PKX4 331 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 HSDL2Q6YN16 418 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 C17orf107Q6ZR85 190 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 Q6ZSN1 163 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 TRMT10CQ7L0Y3 403 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 COPS6Q7L5N1 327 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 SCD5Q86SK9 330 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 DHDDSQ86SQ9 333 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 MAP7D3Q8IWC1 876 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 ZC3H3Q8IXZ2 948 aaKnown RBP3.65□□□□□ -1.82
SKP1-209ENST00000522552 NAGSQ8N159 534 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 GBGT1Q8N5D6 347 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 LRTM2Q8N967 370 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 MLKLQ8NB16 471 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 OR2L3Q8NG85 312 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 OR51G2Q8NGK0 314 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 OR4D5Q8NGN0 318 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 CERS2Q96G23 380 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 RAB11FIP5Q9BXF6 653 aa3.65□□□□□ -1.82
SKP1-209ENST00000522552 PRRG3Q9BZD7 231 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms